Publications by authors named "Michaela Efenberkova"

Article Synopsis
  • Tens of thousands of long non-coding RNA (lncRNA) genes exist, but only a few have established functions, especially in mouse oocytes where the role of lncRNAs like Sirena1 was previously unknown.
  • Sirena1, the most expressed lncRNA in mouse oocytes, has evolved functions in RNA interference and is involved in regulating maternal mRNA through unique mechanisms, despite not affecting fertility directly.
  • Knock-out studies show that while Sirena1 alters the maternal transcriptome and affects mitochondrial organization, it highlights the complex evolutionary role of lncRNAs which may not translate to significant laboratory impacts.
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Rhabdomyosarcomas (RMS) are a heterogeneous group of mesodermal tumors, the most common sub-types are embryonal (eRMS) and alveolar (aRMS) rhabdomyosarcoma. Immunohistochemical analysis revealed c-Myb expression in both eRMS and aRMS. c-Myb has been reported to be often associated with malignant human cancers.

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The organization of the nuclear periphery is crucial for many nuclear functions. Nuclear lamins form dense network at the nuclear periphery and play a substantial role in chromatin organization, transcription regulation and in organization of nuclear pore complexes (NPCs). Here, we show that TPR, the protein located preferentially within the nuclear baskets of NPCs, associates with lamin B1.

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The nuclear periphery (NP) plays a substantial role in chromatin organization. Heterochromatin at the NP is interspersed with active chromatin surrounding nuclear pore complexes (NPCs); however, details of the peripheral chromatin organization are missing. To discern the distribution of epigenetic marks at the NP of HeLa nuclei, we used structured illumination microscopy combined with a new MATLAB software tool for automatic NP and NPC detection, measurements of fluorescent intensity and statistical analysis of measured data.

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