Publications by authors named "Michael Doody"

Fluctuations in the initiation rate of transcription, the first step in gene expression, ensue from the stochastic behavior of the molecular process that controls transcription. In steady state, the regulatory process is often assumed to operate reversibly, i.e.

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The chromatin architecture in promoters is thought to regulate gene expression, but it remains uncertain how most transcription factors (TFs) impact nucleosome position. The MuvB TF complex regulates cell-cycle dependent gene-expression and is critical for differentiation and proliferation during development and cancer. MuvB can both positively and negatively regulate expression, but the structure of MuvB and its biochemical function are poorly understood.

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Article Synopsis
  • Coupling nucleic acid processing enzymes with nanoscale pores enables the controlled movement of DNA or RNA strands, which can be monitored through ionic current measurements over time.
  • The phi29 DNA polymerase is particularly effective for this method due to its strong binding to DNA and ability to replicate efficiently.
  • This study demonstrates the stability of phi29 DNAP-DNA complexes within the nanopore and allows for real-time observation of DNA synthesis and translocation at extremely precise measurements.
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