Publications by authors named "Menghao Guo"

Article Synopsis
  • The emergence of CRISPR-Cas systems has led to the development of efficient gene editing tools, but traditional methods for discovering these systems often overlook important variants due to their reliance on sequence similarity.* -
  • A new AI framework called CHOOSER has been introduced to discover CRISPR-Cas systems without needing extensive training data, significantly enhancing the discovery process by utilizing protein large language models.* -
  • Using CHOOSER, researchers identified 11 new Casλ homologs, doubling the known catalog, and experimentally validated one homolog, EphcCasλ, for its capability in self-processing pre-crRNA and potential in CRISPR-based pathogen detection.*
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The existing lattice-based cut-and-choose oblivious transfer protocol is constructed based on the learning-with-errors (LWE) problem, which generally has the problem of inefficiency. An efficient cut-and-choose oblivious transfer protocol is proposed based on the difficult module-learning-with-errors (MLWE) problem. Compression and decompression techniques are introduced in the LWE-based dual-mode encryption system to improve it to an MLWE-based dual-mode encryption framework, which is applied to the protocol as an intermediate scheme.

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Article Synopsis
  • Foundation models have achieved strong results in areas like natural language processing and computer vision, but they often require fine-tuning with specific knowledge for expert-level performance.
  • The paper introduces a new adapter called lusterAdapter that enhances the tuning process of the CLIP model, focusing on vision-language tasks using few annotated samples while preventing loss of prior knowledge.
  • Extensive experiments show that lusterAdapter significantly outperforms the original CLIP and other methods, achieving state-of-the-art performance across multiple classification benchmarks, with notable accuracy improvements.
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Silver nanoparticles (AgNPs) garnered significant attention and applications in the field of nanotechnology due to their unique physicochemical properties. However, with the increasing exposure of AgNPs in the environment and biological systems, concerns about their potential neurotoxicity have also risen. Recent studies on the neurotoxic effects and mechanisms of AgNPs have often relied on traditional toxicological research methods and perspectives.

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Although most petroleum oil species can be identified by their fluorescence spectra, overlapping fluorescence spectra make identification difficult. This study aims to address the issue that fluorescence spectroscopy is ineffective in identifying overlapping oil species. In this study, an equivalent model of overlapping oil species with fluorescence spectra was established.

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Acyl-Coenzyme As (acyl-CoAs) are essential intermediates to incorporate carboxylic acids into the bioactive metabolic network across all species, which play important roles in lipid remodeling, fatty acids, and xenobiotic carboxylic metabolism. However, due to the poor liquid chromatographic behavior, the relatively low mass spectrometry (MS) sensitivity, and lack of authentic standards for annotation, the in-depth untargeted profiling of acyl-CoAs is challenging. We developed a chemical derivatization strategy of acyl-CoAs by employing 8-(diazomethyl) quinoline (8-DMQ) as the labeling reagent, which increased the detection sensitivity by 625-fold with good peak shapes.

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A mechanism exploration is an important part of toxicological studies. However, traditional cell and animal models can no longer meet the current needs for in-depth studies of toxicological mechanisms. The three-dimensional (3D) organoid derived from human embryonic stem cells (hESC) or induced pluripotent stem cells (hiPSC) is an ideal experimental model for the study of toxicological effects and mechanisms, which further recapitulates the human tissue microenvironment and provides a reliable method for studying complex cell-cell interactions.

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Mitophagy is a selective cellular process critical for the removal of damaged mitochondria. It is essential in regulating mitochondrial number, ensuring mitochondrial functionality, and maintaining cellular equilibrium, ultimately influencing cell destiny. Numerous pathologies, such as neurodegenerative diseases, cardiovascular disorders, cancers, and various other conditions, are associated with mitochondrial dysfunctions.

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Silver nanoparticles (AgNPs) have been widely used in biomedicine and cosmetics, increasing their potential risks in neurotoxicity. But the involved molecular mechanism remains unclear. This study aims to explore molecular events related to AgNPs-induced neuronal damage by RNA-seq, and elucidate the role of Ca/CaMKII signal and Drp1-dependent mitochondrial disorder in HT22 cells synaptic degeneration induced by AgNPs.

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Generated from plastics, microplastics (MPs) and nanoplastics (NPs) are difficult to completely degrade in the natural environment, which can accumulate in almost all lives. Liver is one of the main target organs. In this study, HepG2 and L02 cells were exposed to 0-50 μg/mL polystyrene (PS)-NPs to investigate the mechanism of mitochondrial damage and inflammation.

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Silver nanoparticles (AgNPs) are widely used in many commercial and medical products. Serious concerns are paid on their adverse potentials to the environment and human health. In this study, toxic effects and oxidative stress induced by AgNPs with different sizes and coatings (20 nm AgNPs, 20 nm polyvinylpyrrolidone (PVP) -AgNPs and 50 nm AgNPs) in () were investigated.

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Silver nanoparticles (AgNPs) have widely used in industrial and medical applications for their excellent antibacterial activities. AgNPs can penetrate into the brain and cause neuronal death, but limited evidence focused on toxic effects and mechanic study in hippocampal neuron. This study aimed to investigate the molecular mechanisms of mitochondrial damage and apoptosis in mouse hippocampal HT22 cells and further to explore role of reactive oxygen species (ROS) and GTPase dynamin-related protein 1 (Drp1) in AgNPs-induced neurotoxicity.

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Microplastics have become a serious environmental pollutant and subsequently have harmful effects on human health. Thus, the impacts of microplastics on human cells need to be explored. In the present study, the cytotoxic effects at the subcellular-organelle levels to polystyrene nanoplastics (PS-NPs, diameter 21.

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In order to improve the melt foaming properties of thermoplastic polyamide elastomers and reduce the shrinkage rate of foamed materials, acid anhydride chain extenders SMA (styrene maleic anhydride copolymer) are used in this paper to in situ reactive blending thermoplastic polyamide elastomers (TPAE) and polyamide 6 (PA6). The rheological and crystalline properties of the modified samples were characterized by a rotational rheometer and differential scanning calorimeter, and the melt batch foaming experiment with CO as the foaming agent was carried out. The results showed that the melting enthalpy of modified TPAE reduced with the addition of content of PA6, which implied that the crystallinity of the hard phase of the system was depressed.

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Recombinant human metallothionein III (rh-MT-III) is a genetically engineered product produced by Escherichia coli fermentation technology. Its molecules contain abundant reducing sulfhydryl groups, which possess the ability to bind heavy metal ions. The present study was to evaluate the binding effects of rh-MT-III against copper and cadmium in vitro and to investigate the antioxidant activity of rh-MT-III using Caenorhabditis elegans in vivo.

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Silver nanoparticles (AgNPs) are widely used in various fields such as industry, agriculture, and medical care because of their excellent broad-spectrum antibacterial activity. However, their extensive use has raised concerns about their health risks. Liver is one of the main target organs for the accumulation and action of AgNPs.

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Silver nanoparticles (AgNPs) have been incorporated in many consumer and biomedical products. Serious concerns have been expressed about the environmental and public health risks caused by nanoparticles. In previous studies, we found that AgNPs induced microglia polarization of the inflammatory phenotype.

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Article Synopsis
  • Self-attention is crucial for deep learning in visual tasks, but it has a quadratic complexity and doesn't account for correlations between different samples.
  • The article introduces "external attention," which uses two small, shared memories and linear layers to replace self-attention, resulting in linear complexity and better handling of sample correlations.
  • The new external attention mechanism, combined with a multi-head approach, forms an all-MLP architecture called EAMLP, demonstrating competitive performance in various tasks with lower computational costs.
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Arsenic (As) pollution is a serious and longstanding problem, which has obvious threaten to aquatic organisms. The study aimed to explore the mitigation effect of natural antioxidant zinc (Zn) on As toxicity in the foregut and midgut of common carp (Cyprinus carpio L.), and in-depth disclose related signal cascade.

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Arsenic (As) is widely present in the environment in form of arsenite (As) and arsenate (As). Oxidative stress and inflammation are believed to be the dominant mechanisms of As toxicity in vivo and in vitro. The aim of this study was to investigate whether zinc (Zn) alleviates exogenous gill toxicity in carp induced by As and to gain insight into the underlying mechanisms.

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Article Synopsis
  • Microplastics (MPs) are a new environmental pollutant found in freshwater systems, particularly studied in Northeast China, raising concerns about their ecological impact and relation to human activities.
  • In a survey of 19 water samples from Chagan Lake and Xianghai, the abundance of MPs was significantly higher in Chagan Lake (3.61 particles/L) compared to Xianghai (0.29 particles/L), with different dominant types of MPs noted.
  • Analysis showed that human activities, like tourism and fishing in Chagan Lake and aquaculture in Xianghai, correlated positively with MP abundance, but overall pollution risks from MPs were deemed relatively low based on hazard and pollution indices.
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As a group of cytokines, interferons are the first line of defense in the antiviral immunity. In this study, Siberian tiger IFN-β (PtIFN-β) and IFN-γ (PtIFN-γ) were successfully amplified, and the two were fused (PtIFN-γ) by overlap extension polymerase chain reaction (SOE-PCR). Bioinformatics analysis disclosed that PtIFN-β and PtIFN-γ have species-specificity and conservation in the course of evolution.

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Arsenic pollution is a common threat to aquatic ecosystems. The effects of chronic exposure to arsenite on the brains of aquatic organisms are unknown. This study was designed to evaluate arsenic-induced brain damage in common carp (Cyprinus carpio) and the ameliorating effects of divalent zinc ion (Zn) supplementation from the aspects of oxidative stress (OxS), tight junction (TJ), apoptosis and autophagy.

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