Publications by authors named "Melnikova N"

(β-ketoacyl-acyl carrier protein (ACP) synthases II), (fatty acid thioesterases), (stearoyl-ACP desaturase), and (fatty acid desaturases) are the vital gene families involved in fatty acid (FA) synthesis in L. However, information on the number and location of these genes and which ones are key to the formation of FAs in fruit seeds and pulp was not complete. Our study aimed to solve this issue using the available genomic sequences and transcriptome data that we obtained.

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Flax is an important crop grown for seed and fiber. Flax chromosome number is 2n = 30, and its genome size is about 450-480 Mb. To date, the genomes of several flax varieties have been sequenced and assembled.

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is a pathogenic fungus that infects flax and causes significant yield losses. In this study, we assembled the genomes of four highly virulent strains using the Oxford Nanopore Technologies (ONT, R10.4.

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Article Synopsis
  • A fungal pathogen affecting flax, strain #394-2, was studied, resulting in the first complete annotated genome assembly, revealing a nuclear genome of 53.7 Mb with ten core and two accessory chromosomes and a mitochondrial genome of 39.1 kb.
  • The annotation process identified 12,449 genes and predicted 550 effector proteins, suggesting a significant role in the pathogen's virulence, particularly in repeat-rich genomic regions.
  • Comparing the genomic structures among related species showed differences due to chromosomal rearrangements, which helps enhance the understanding of the pathogen's mechanisms and contributes to strategies for protecting flax from damage.
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Flax seed is one of the richest plant sources of linolenic acid (LIN) and also contains unsaturated linoleic acid (LIO) and oleic acid (OLE). Stearoyl-ACP desaturases (SADs) and fatty acid desaturases (FADs) play key roles in the synthesis of flax fatty acids (FAs). However, there is no holistic view of which genes from the and families and at which developmental stages have the highest expression levels in flax seeds, as well as the influence of genotype and growth conditions on the expression profiles of these genes.

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is a flax fungal pathogen. The genus comprises differently virulent strains, leading to significant yield losses. However, there were no attempts to investigate the molecular mechanisms of pathogenicity from high-quality genome assemblies until this study.

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The white poplar ( L.) has good potential for a green economy and phytoremediation. Bioaugmentation using endophytic bacteria can be considered as a safe strategy to increase poplar productivity and its resistance to toxic urban conditions.

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Article Synopsis
  • Sequencing whole plant genomes is crucial for both applied and fundamental research, particularly in agriculture, as it helps understand beneficial traits of plants.
  • Flax is an important crop valued for its oil and fiber, and its genome sequence can provide valuable genetic information for improving cultivated varieties.
  • The authors successfully sequenced the first genome of a specific flax variety using Oxford Nanopore and Illumina technologies, achieving a high-quality assembly that enables future studies on plant evolution, domestication, and genome regulation.
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Flax ( L.), one of the important and versatile crops, is used for the production of oil and fiber. To obtain high and stable yields of flax products, varieties should be cultivated under optimal conditions, including the composition of the soil microbiome.

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Flax ( L.) products are used in the food, pharmaceutical, textile, polymer, medical, and other industries. The creation of a pan-genome will be an important advance in flax research and breeding.

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Members of the genus L. play an important role in the formation of forests in the northern hemisphere and are used in urban landscaping and timber production. species of closely related sections show extensive hybridization.

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(fatty acid desaturase) and (stearoyl-ACP desaturase) genes play key roles in the synthesis of fatty acids (FA) and determination of oil composition in flax ( L.). We searched for and genes in the most widely used flax genome of the variety CDC Bethune and three available long-read assembled flax genomes-YY5, 3896, and Atlant.

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In this work we studied nanoceria (CeONPs) and nanoceria modified by 5-fluorouracil (5FU) as potential APIs. Nanoceria were synthesized by precipitation in a matrix of hydroxyethyl cellulose or hydroxypropylmethyl cellulose, using cerium (III) nitrate and meglumine. Nanoceria properties were estimated by UV, FTIR and X-ray photoelectron spectra; scanning electron and atomic force microscopy; powder X-ray diffraction patterns and energy dispersive X-ray microanalysis.

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A soft synthesis of nanoceria with non-stoichiometric composition (33% Ce/67% Ce) named CeO NPs in bacterial cellulose (BC) matrix in the form of aerogel and hydrogel with controlled CeO NPs content was proposed. The advantage of CeO NPs synthesis in BC is the use of systemic antacid API-trisamine as a precursor, which did not destruct cellulose at room temperature and enabled a reduction in the duration of synthesis and the number of washes. Moreover, this method resulted in the subsequent uniform distribution of CeO NPs in the BC matrix due to cerium (III) nitrate sorption in the BC matrix.

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Flax ( L.) is attacked by numerous devastating fungal pathogens, including , , and (). The effective control of flax diseases follows the paradigm of extensive molecular research on pathogenicity.

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Radical prostatectomy is the gold standard treatment for prostate cancer (PCa); however, it does not always completely cure PCa, and patients often experience a recurrence of the disease. In addition, the clinical and pathological parameters used to assess the prognosis and choose further tactics for treating a patient are insufficiently informative and need to be supplemented with new markers. In this study, we performed RNA-Seq of PCa tissue samples, aimed at identifying potential prognostic markers at the level of gene expression and miRNAs associated with one of the key signs of cancer aggressiveness-lymphatic dissemination.

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Flax is grown worldwide for seed and fiber production. Linseed varieties differ in their oil composition and are used in pharmaceutical, food, feed, and industrial production. The field of application primarily depends on the content of linolenic (LIN) and linoleic (LIO) fatty acids.

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Head and neck paragangliomas (HNPGLs) are rare neuroendocrine neoplasms derived from the parasympathetic paraganglia of the head and neck. At least 30% of HNPGLs are linked to germline mutations, predominantly in genes. In this study, we analyzed an extended cohort of Russian patients with HNPGLs using whole-exome sequencing and found a highly frequent missense variant p.

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Parkinson's disease (PD) is a slowly progressive neurodegenerative disease, the main symptoms of which are motor impairments (bradykinesia, rigidity, tremor and postural instability). However, the longer this disease is studied, the more new (non-motor) manifestations of the disease are detected. The article discusses visual disturbances that occur in patients with PD, the underlying pathogenetic mechanisms and methods of their treatment.

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High-quality genome sequences help to elucidate the genetic basis of numerous biological processes and track species evolution. For flax ( L.)-a multifunctional crop, high-quality assemblies from Oxford Nanopore Technologies (ONT) data were unavailable, largely due to the difficulty of isolating pure high-molecular-weight DNA.

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The synthesis of two new copolymer conjugates of methoxyoligo(ethylene glycol)methacrylate MPEGMA and betulin methacrylate BM was developed via RAFT polymerization. The molar content of BM units was equal to 9-10 and 13-16 mol%, respectively (HPLC, H and C NMR); molar weights were equal to 75000-115000. CeO NPs as a component of the hybrid material were synthesized for the preparation of the composition with copolymer conjugates of MPEGMA and BM.

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The investigation of plant genomes is of great importance for basic research and practical breeding. In 1977, F. Sanger proposed a DNA sequencing method, which allowed the complete sequences of a number of genomes to be determined.

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The relative abundance of two main Abeta-peptide types with different lengths, Aβ40 and Aβ42, determines the severity of the Alzheimer's disease progression. However, the factors responsible for different behavior patterns of these peptides in the amyloidogenesis process remain unknown. In this comprehensive study, new evidence on Aβ40 and Aβ42 amyloid polymorphism was obtained using a wide range of experimental approaches, including custom-designed approaches.

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The phylogeny of members of the family DC. ex Perleb has not been adequately studied. In particular, data on the phylogenetic relationship between Planch.

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