Publications by authors named "Meer D"

While brainstem regions are central regulators of blood pressure, the neuronal mechanisms underlying their role in hypertension remain poorly understood. Here, we investigated the structural and genetic relationships between global and regional brainstem volumes and blood pressure. We used magnetic resonance imaging data from n = 32,666 UK Biobank participants, and assessed the association of volumes of the whole brainstem and its main regions with blood pressure.

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  • Subcortical brain structures play a crucial role in various developmental and psychiatric disorders, and a study analyzed brain volumes in 74,898 individuals, identifying 254 genetic loci linked to these volumes, which accounted for up to 35% of variation.
  • The research included exploring gene expression in specific neural cell types, focusing on genes involved in intracellular signaling and processes related to brain aging.
  • The findings suggest that certain genetic variants not only influence brain volume but also have potential causal links to conditions like Parkinson’s disease and ADHD, highlighting the genetic basis for risks associated with neuropsychiatric disorders.
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  • Cognitive impairment is common in individuals with epilepsy, and this study explores the genetic links between different epilepsy subtypes and cognitive ability, revealing that genetic factors play a significant role.
  • Researchers analyzed data from 269,867 individuals regarding cognitive ability and 27,559 cases of common epilepsies, using various statistical tools to identify the genetic variants involved.
  • The findings indicate that cognitive ability has a much larger number of genetic variants compared to epilepsy types, and they identified 66 genetic loci shared between cognitive function and different epilepsy subtypes, suggesting important gene expressions in brain regions affected by both conditions.
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  • Subcortical brain structures play a crucial role in various disorders, and a study analyzed the genetic basis of brain volumes in nearly 75,000 individuals of European ancestry, revealing 254 loci linked to these volumes.
  • The research identified significant gene expression in neural cells, relating to brain aging and signaling, and found that polygenic scores could predict brain volumes across different ancestries.
  • The study highlights genetic connections between brain volumes and conditions like Parkinson's disease and ADHD, suggesting specific gene expression patterns could be involved in neuropsychiatric disorders.
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Correction for 'Flow and clogging of capillary droplets' by Yuxuan Cheng , , 2024, https://doi.org/10.1039/D4SM00752B.

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  • The study aimed to identify genetic factors linked to anxiety disorders and how they overlap with other psychiatric disorders, using a large sample from various studies.
  • Researchers found that anxiety has a complex genetic architecture involving around 12,900 genetic variants, with significant overlap with disorders like schizophrenia and major depression, among others.
  • The findings revealed 119 new genetic loci associated with anxiety, suggesting potential biological pathways for developing new treatments and explaining the frequent co-occurrence of anxiety with other psychiatric conditions.
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Capillary droplets form due to surface tension when two immiscible fluids are mixed. We describe the motion of gravity-driven capillary droplets flowing through narrow constrictions and obstacle arrays in both simulations and experiments. Our new capillary deformable particle model recapitulates the shape and velocity of single oil droplets in water as they pass through narrow constrictions in microfluidic chambers.

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Valproic acid (VPA) is used for epilepsy and bipolar disorder. It has near-complete bioavailability and is primarily metabolized by glucuronosyltransferases and mitochondrial oxidation. This case highlights a 79-year-old male with bipolar disorder on VPA therapy that started with flucloxacillin for Staphylococcus aureus bacteraemia and exhibited significantly reduced VPA serum levels.

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Background: During the course of adulthood and aging, white matter (WM) structure and organization are characterized by slow degradation processes such as demyelination and shrinkage. An acceleration of such aging processes has been linked to the development of a range of diseases. Thus, an accurate description of healthy brain maturation, particularly in terms of WM features, is fundamental to the understanding of aging.

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Circles of a single size can pack together densely in a hexagonal lattice, but adding in size variety disrupts the order of those packings. We conduct simulations which generate dense random packings of circles with specified size distributions and measure the area fraction in each case. While the size distributions can be arbitrary, we find that for a wide range of size distributions the random close-packing area fraction ϕ_{rcp} under this general protocol is determined to high accuracy by the polydispersity and skewness of the size distribution.

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In this work, we performed experiments regarding the outflow of spheres and two different types of rice-shaped particles in a quasi-two-dimensional monolayer silo with a flat bottom. We investigate the velocity and solid fraction profiles at the orifice and test whether the profiles for nonspherical particles have similar self-similar properties as in the spherical case. We find that the magnitude and shape of the velocity profiles for all three particle types are in a similar range.

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When a pure ethanol droplet is deposited on a dry, wettable and conductive substrate, it is expected to spread into a thin, uniform film. Here, we demonstrate that this uniform spreading behaviour can be altered significantly by controlling the ambient relative humidity. We show that higher relative humidity not only promotes faster spreading of the droplet, it also destabilizes the moving contact line, resulting in a fingering instability.

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  • Cognitive impairment significantly impacts functional outcomes in schizophrenia, but the biological causes of this dysfunction are still not fully understood.
  • The study used advanced genetic modeling to identify three main factors linked to cognitive traits from the UK Biobank, revealing a moderate negative genetic correlation between these cognitive factors and schizophrenia.
  • Results show that while there's a shared genetic basis between cognitive abilities and schizophrenia, the genetic factors do not predict specific schizophrenia symptoms, suggesting distinct underlying genetic architectures for cognitive function and the disorder.
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While genome-wide association studies are increasingly successful in discovering genomic loci associated with complex human traits and disorders, the biological interpretation of these findings remains challenging. Here we developed the GSA-MiXeR analytical tool for gene set analysis (GSA), which fits a model for the heritability of individual genes, accounting for linkage disequilibrium across variants and allowing the quantification of partitioned heritability and fold enrichment for small gene sets. We validated the method using extensive simulations and sensitivity analyses.

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Background And Objectives: Epilepsies are associated with differences in cortical thickness (TH) and surface area (SA). However, the mechanisms underlying these relationships remain elusive. We investigated the extent to which these phenotypes share genetic influences.

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  • This study focuses on creating a blood test to identify fibrosis in patients with metabolic dysfunction-associated steatotic liver disease (MASLD) using a gene expression signature found in a mouse model.
  • Researchers developed a biomarker panel made up of three proteins: IGFBP7, SSc5D, and Sema4D, which effectively predicts different levels of liver fibrosis.
  • The new blood-based test shows better accuracy in detecting fibrosis stages compared to existing methods like Fib-4, APRI, and FibroScan, making it a promising tool for diagnosing MASLD-related liver issues.
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Purpose 4D computed tomography (4DCT) is the clinical standard to image organ motion in radiotherapy, although it is limited in imaging breathing variability. We propose a method to transfer breathing motion across longitudinal imaging datasets to include intra-patient variability and verify its performance in lung cancer patients. Methods Five repeated control 4DCTs for 6 non-small cell lung cancer patients were combined into multi-breath datasets (m4DCT) by merging stages of deformable image registration to isolate respiratory motion.

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Unlabelled: Viral enrichment by probe hybridization has been reported to significantly increase the sensitivity of viral metagenomics. This study compares the analytical performance of two targeted metagenomic virus capture probe-based methods: (i) SeqCap EZ HyperCap by Roche (ViroCap) and (ii) Twist Comprehensive Viral Research Panel workflow, for diagnostic use. Sensitivity, specificity, and limit of detection were analyzed using 25 synthetic viral sequences spiked in increasing proportions of human background DNA, eight clinical samples, and American Type Culture Collection (ATCC) Virome Virus Mix.

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Ageing is a heterogeneous multisystem process involving different rates of decline in physiological integrity across biological systems. The current study dissects the unique and common variance across body and brain health indicators and parses inter-individual heterogeneity in the multisystem ageing process. Using machine-learning regression models on the UK Biobank data set (N = 32,593, age range 44.

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Oxytocin is a neuropeptide associated with both psychological and somatic processes like parturition and social bonding. Although oxytocin homologs have been identified in many species, the evolutionary timeline of the entire oxytocin signaling gene pathway has yet to be described. Using protein sequence similarity searches, microsynteny, and phylostratigraphy, we assigned the genes supporting the oxytocin pathway to different phylostrata based on when we found they likely arose in evolution.

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Objective: Cognitive impairment is prevalent among individuals with epilepsy, and it is possible that genetic factors can underlie this relationship. Here, we investigated the potential shared genetic basis of common epilepsies and general cognitive ability (COG).

Methods: We applied linkage disequilibrium score (LDSC) regression, MiXeR and conjunctional false discovery rate (conjFDR) to analyze different aspects of genetic overlap between COG and epilepsies.

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Genetic pleiotropy is abundant across spatially distributed brain characteristics derived from one neuroimaging modality (e.g. structural, functional or diffusion magnetic resonance imaging [MRI]).

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Sarcopenia refers to age-related loss of muscle mass and function and is related to impaired somatic and brain health, including cognitive decline and Alzheimer's disease. However, the relationships between sarcopenia, brain structure and cognition are poorly understood. Here, we investigate the associations between sarcopenic traits, brain structure and cognitive performance.

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Comorbidities are an increasing global health challenge. Accumulating evidence suggests overlapping genetic architectures underlying comorbid complex human traits and disorders. The bivariate causal mixture model (MiXeR) can quantify the polygenic overlap between complex phenotypes beyond global genetic correlation.

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Unlabelled: Oncology drug combinations can improve therapeutic responses and increase treatment options for patients. The number of possible combinations is vast and responses can be context-specific. Systematic screens can identify clinically relevant, actionable combinations in defined patient subtypes.

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