Publications by authors named "McGrath F"

Ultrashort pulses can excite or ionize molecules and populate coherent electronic wave packets, inducing complex dynamics. In this Letter, we simulate the coupled electron-nuclear dynamics upon ionization to different electronic wave packets of (deuterated) benzene and fluoro-benzene molecules, quantum mechanically and in full dimensionality. In fluoro-benzene, the calculations unravel both interstate and intrastate quantum interferences that leave clear signatures of attochemistry and charge-directed dynamics in the shape of the autocorrelation function.

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Sars-CoV2/COVID-19 pandemic created a national emergency in Ireland. Our institution implemented a virtual trauma assessment clinic to reduce attendance to our district hospital which was stimulated by the development of 'safe-distanced' care. The audit aimed to evaluate the impact of our trauma assessment clinic on care provision and presentation to hospital.

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Article Synopsis
  • Researchers aimed to improve understanding of anaphylaxis by examining changes in gene expression in patients presenting with varying severities of the condition.
  • An analysis of a microarray data set revealed that severe anaphylaxis showed dysregulated platelet aggregation at initial presentation, a phenomenon not seen in moderate cases or other conditions like sepsis or trauma.
  • Seven specific genes related to platelet function were significantly downregulated in severe anaphylaxis patients who hadn't received adrenaline, suggesting that these genetic changes could indicate the severity of the anaphylactic reaction.
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  • Somatic mutations play a crucial role in cancer development, with many known driver mutations found in protein coding regions, but the impact of mutations in miRNAs and their binding sites is poorly understood.
  • This study created cancer-specific miRNA regulatory networks for 30 cancer types, analyzing over 3.5 million mutations and revealing that mutations in miRNAs often occur alongside mutations in their target genes, influencing gene expression.
  • The findings highlight 148 potential driver mutations that disrupt miRNA networks, suggesting that downregulated targets in 3' UTRs may act as tumor suppressors, and they introduce a web portal (mGI-map) to help researchers explore this data for future biomarker and drug development.
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A woman in her 40s with advanced bladder cancer was admitted to hospital with hypercalcaemia of malignancy. Initially, she presented with non-specific symptoms of malaise, fatigue and general deterioration. She was treated with intravenous fluids and zoledronic acid in order to bring her calcium levels down, but subsequently developed significant hypocalcaemia.

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Background: Anaphylaxis is a severe, potentially life-threatening allergic reaction driven primarily by the activation of mast cells. We still fail to understand factors underlying reaction severity. Furthermore, there is currently no reliable diagnostic test to confirm anaphylaxis in the emergency department (ED).

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We present a new methodology for measuring few-femtosecond electronic and nuclear dynamics in both atoms and polyatomic molecules using multidimensional high harmonic generation (HHG) spectroscopy measurements, in which the spectra are recorded as a function of the laser intensity to form a two-dimensional data set. The method is applied to xenon atoms and to benzene molecules, the latter exhibiting significant fast nuclear dynamics following ionization. We uncover the signature of the sub-cycle evolution of the returning electron flux in strong-field ionized xenon atoms, implicit in the strong field approximation but not previously observed directly.

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Nanocrystals of the inorganic perovskite, CsPbBr, display outstanding photo-physical properties, making them ideal for next generation optical devices. However, the typical combination of oleic acid and oleylamine ligands employed in their synthesis is easily displaced, leading to poor stability that can hinder their applicability. In this work, we look toward the replacement of the oleic acid and amine with phosphorous-based ligands.

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Climate impacts and adaptation studies often use output from impact models that require data representing future climates at a resolution greater than can be provided by Global Climate Models (GCMs). This paper describes the use of Regional Climate Model (RCM) simulations to generate high-resolution future climate information for assessing climate impacts in the Ganges-Brahmaputra-Meghna (GBM) and Mahanadi deltas as part of the DECCMA project. In this study, three different GCMs (HadGEM2-ES, CNRM-CM5 and GFDL-CM3), all using a single scenario for future greenhouse forcing of the atmosphere (RCP 8.

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A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper.

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Structural isomers, molecules having the same chemical formula but with atoms bonded in different order, are hard to identify using conventional spectroscopy and mass spectrometry. They exhibit virtually indistinguishable mass spectra when ionized by electrons. Laser mass spectrometry based on photoionization of the isomers has emerged as a promising alternative but requires shaped ultrafast laser pulses.

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We present an apparatus for performing gas phase high-harmonic generation spectroscopy of molecules primarily found in the liquid phase. Liquid molecular samples are heated in a temperature controlled bath and their vapour is used to back a continuous flow gas jet, with vapour pressures of over 1 bar possible. In order to demonstrate the system, we perform high harmonic spectroscopy experiments in benzene with a 1.

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Purpose: We aimed to evaluate limb salvage, defined as freedom from major amputation, and to identify predictors of major amputation in patients with infrapopliteal peripheral arterial disease (PAD) based on the updated 2015 TASC II anatomic classification treated by percutaneous transluminal angioplasty (PTA).

Methods: This was a retrospective study of infrapopliteal PTA procedures performed for PAD over a 4-year period. Patient demographics, medical comorbidities, risk factors, angiographic imaging, technical details, and clinical follow-up were analyzed to determine limb salvage rates, technical success, and all-cause mortality.

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Background: Despite their well-recognised shortcomings, haemodialysis catheters (HDCs) remain an important form of haemodialysis access for many patients. There are several HDCs commercially available, each differing considerably in design, which is known to significantly influence performance and survival. We sought to determine which of two tunnelled HDCs, DuraMax® (Angiodynamics, NY, USA) or SplitCath® (MedComp, PA, USA) delivers the best performance, safety and reliability for dialysis patients.

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Article Synopsis
  • The study examines high-harmonic generation in three organic solvents—toluene, ortho-xylene, and fluorobenzene—using a 1.8 μm ultrashort pulse.
  • Chemical substitutions in these compounds significantly affect the amplitude and phase of emissions from the highest occupied molecular orbital, despite minimal changes to the orbital itself.
  • The research attributes these effects to the tunnel ionization step, highlighting its dependence on the wave function's characteristics, with implications for phase-sensitive high-harmonic generation spectroscopy experiments.
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Objectives: To identify the prevalence of hip disorders in elite level academy rugby union players using clinical and radiological investigation comparing findings to active controls.

Design: Cross-sectional, controlled study.

Methods: Participants were assessed clinically using validated questionnaire (HAGOS) and physical testing procedures.

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Purpose: Internal iliac artery (IIA) embolisation is commonly performed prior to endovascular aneurysm repair (EVAR) of aortoiliac aneurysms to prevent type 2 endoleaks via the internal iliac arteries. The safety of this procedure is controversial due to the high incidence of pelvic ischaemic complications.

Methods: We undertook a retrospective review of all patients undergoing IIA embolisation before EVAR from 2002 to 2012, to determine incidence of, and factors associated with pelvic ischaemia.

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Objective: Vascular calcification (VC) is inhibited by the glycoprotein osteoprotegerin (OPG). It is unclear whether treatments for type 2 diabetes are capable of promoting or inhibiting VC. The present study examined the effects of insulin and liraglutide on i) the production of OPG and ii) the emergence of VC, both in vitro in human aortic smooth muscle cells (HASMCs) and in vivo in type 2 diabetes.

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Purpose: To prospectively compare the procedural time and complication rates of ultrasound-guided and fluoroscopy-assisted antegrade common femoral artery (CFA) puncture techniques.

Materials And Methods: Hundred consecutive patients, undergoing a vascular procedure for which an antegrade approach was deemed necessary/desirable, were randomly assigned to undergo either ultrasound-guided or fluoroscopy-assisted CFA puncture. Time taken from administration of local anaesthetic to vascular sheath insertion in the superficial femoral artery (SFA), patients' age, body mass index (BMI), fluoroscopy radiation dose, haemostasis method and immediate complications were recorded.

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Despite six decades of clinical experience with the polymyxin class of antibiotics, their dose-limiting nephrotoxicity remains difficult to predict due to a paucity of sensitive biomarkers. Here, we evaluate the performance of standard of care and next-generation biomarkers of renal injury in the detection and monitoring of polymyxin-induced acute kidney injury in male Han Wistar rats using colistin (polymyxin E) and a polymyxin B (PMB) derivative with reduced nephrotoxicity, PMB nonapeptide (PMBN). This study provides the first histopathological and biomarker analysis of PMBN, an important test of the hypothesis that fatty acid modifications and charge reductions in polymyxins can reduce their nephrotoxicity.

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We present studies of high-order harmonic generation (HHG) in laser ablation plumes of the ribonucleic acid nucleobase uracil and its deoxyribonucleic acid counterpart thymine. Harmonics were generated using 780 nm, 30 fs and 1300 nm, 40 fs radiation upon ablation with 1064 nm, 10 ns or 780 nm, 160 ps pulses. Strong HHG signals were observed from uracil plumes with harmonics emitted with photon energies >55 eV.

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Background: Controversies exist around predictive testing (PT) programmes in neurodegenerative disorders.

Aims: This study sets out to answer the following questions relating to Huntington disease (HD) and other neurodegenerative disorders: differences between these patients in their PT journeys, why and when individuals withdraw from PT, and decision-making processes regarding reproductive genetic testing.

Methods: A case series analysis of patients having PT from the multidisciplinary Western Australian centre for PT over the past 20 years was performed using internationally recognised guidelines for predictive gene testing in neurodegenerative disorders.

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