Publications by authors named "Matthieu Ruiz"

Lipids are essential for neuron development and physiology. Yet, the central hubs that coordinate lipid supply and demand in neurons remain unclear. Here, we combine invertebrate and vertebrate models to establish the presence and functional significance of neuronal lipid droplets (LD) .

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  • Lipid droplets (LD) are essential for storing triglycerides and play a significant role in regulating inflammation in cells, influenced by adipose triglyceride lipase (ATGL).
  • The study examined the effects of inhibiting ATGL and the genetic loss of ATGL in microglia on inflammatory responses, particularly focusing on cytokine expression and phagocytosis during LPS-induced inflammation.
  • Findings showed that ATGL inhibition led to reduced expression of pro-inflammatory cytokines (like IL-1β and IL-6), decreased inflammation-related behaviors, and altered lipid profiles, signifying ATGL's critical role in modulating neuroinflammatory responses.
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Background: Despite recent advances the prognosis of pulmonary hypertension remains poor and warrants novel therapeutic options. Extensive studies, including ours, have revealed that hypoxia-induced pulmonary hypertension is associated with high oxidative stress. Cerium oxide nanozyme or nanoparticles (CeNPs) have displayed catalytic activity mimicking both catalase and superoxide dismutase functions and have been widely used as an anti-oxidative stress approach.

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Lymphatic vessels are essential for preventing the accumulation of harmful components within peripheral tissues, including the artery wall. Various endogenous mechanisms maintain adequate lymphatic function throughout life, with platelets being essential for preserving lymphatic vessel integrity. However, since lymph lacks platelets, their impact on the lymphatic system has long been viewed as restricted to areas where lymphatics intersect with blood vessels.

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Background: STIM1 (stromal interaction molecule 1) regulates store-operated calcium entry and is involved in pulmonary artery vasoconstriction and pulmonary artery smooth muscle cell proliferation, leading to pulmonary arterial hypertension (PAH).

Methods: Bioinformatics analysis and a 2-stage matched case-control study were conducted to screen for noncoding variants that may potentially affect transcriptional regulation in 242 patients with idiopathic PAH and 414 healthy controls. Luciferase reporter assay, real-time quantitative polymerase chain reaction, western blot, 5-ethynyl-2'-deoxyuridine (EdU) assay, and intracellular Ca measurement were performed to study the mechanistic roles of those noncoding variants in PAH.

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  • Lean patients with NAFLD can experience cardiac issues without already having metabolic problems or obesity.
  • Researchers studied mice with liver mitochondrial deficiencies, which develop liver fat but not obesity, to understand this connection.
  • The findings revealed that male mice showed more significant cardiac dysfunction and metabolic disturbances than female mice, who had different cardiometabolic problems involving liver and cardiac lipid imbalances.
  • This research highlights how liver metabolism can lead to cardiac issues differently in males and females, emphasizing the need to explore these gender-related differences further in lean NAFLD.
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  • Metabolite genome-wide association studies (mGWAS) help uncover how genetics influence metabolite levels, but interpreting these associations is tough without effective tools.
  • The authors introduce a new metric called shortest reactional distance (SRD) from the KEGG database to improve the biological interpretation of mGWAS results.
  • Their research shows that SRD values correlate well with mGWAS findings and can help identify potential false negatives in existing metabolic pathway databases, making SRD a valuable tool for linking genetics to metabolism.
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Venous thromboembolism (VTE) is a multifactorial disease, and pulmonary hypertension (PH) is a serious condition characterized by pulmonary vascular remodeling leading with increased pulmonary vascular resistance, ultimately leading to right heart failure and death. Although VTE and PH have distinct primary etiologies, they share some pathophysiologic similarities such as dysfunctional vasculature and thrombosis. In both conditions there is solid evidence that EVs derived from a variety of cell types including platelets, monocytes, endothelial cells and smooth muscle cells contribute to vascular endothelial dysfunction, inflammation, thrombosis, cellular activation and communications.

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Background: Epidemiological evidence links the proprotein convertase subtilisin/kexin 7 (PCSK7) to triglyceride (TG) metabolism. We associated the known PCSK7 gain-of-function non-coding SNP rs236918 with higher levels of plasma apolipoprotein B (apoB) and the loss-of-function coding variant p.Pro777Leu (SNP rs201598301) with lower apoB and TG.

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  • Very-long chain acyl-CoA dehydrogenase (VLCAD) is essential for breaking down long-chain fatty acids, and a deficiency can lead to unexplained heart rhythm issues in newborns.
  • Researchers tested VLCAD mice to examine how their heart's fat composition is altered, especially under high-fat diet conditions known to exacerbate symptoms in humans.
  • The study found significant lipid imbalances in VLCAD mice, including changes in fatty acid types and levels of specific molecules linked to heart rhythm regulation, suggesting that deficiencies in lipid metabolism may lead to calcium handling problems and stress in heart cells, contributing to arrhythmias.
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Introduction: Aberrant gene expression is a key mechanism underlying pulmonary hypertension (PH) development. The alterations of genomic chromatin accessibility and their relationship with the aberrant gene expressions in PH are poorly understood. We used bulk Assay for Transposase-Accessible Chromatin with high-throughput sequencing (ATAC-seq) and RNA sequencing (RNA-seq) in pulmonary artery smooth muscle cells (PASMCs) of chronic hypoxia-exposed rats mimicking group 3 human PH.

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  • * This research calculates the shortest reactional distance (SRD) using data from the KEGG database to enhance the interpretation of mGWAS results, demonstrating a correlation between SRD values and statistical significance.
  • * The SRD metric could help identify potentially overlooked gene-metabolite associations and rectify inaccuracies in metabolic pathway databases, emphasizing its value as a reliable tool for integrating statistical data with biological networks.
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Agrobacterium tumefaciens is a natural genetic engineer that transfers DNA into plants, which is the most applied process for generation of genetically modified plants. DNA transfer is mediated by a type IV secretion system in the cell envelope and extracellular T-pili. We here report the cryo-electron microscopic structures of the T-pilus at 3.

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The human microbiota is believed to influence health. Microbiome dysbiosis may be linked to neurological conditions like Alzheimer's disease, amyotrophic lateral sclerosis, and Huntington's disease. We report the ability of a probiotic bacterial strain in halting neurodegeneration phenotypes.

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Background: Overproduction of endothelial extracellular vesicles (eEVs) is correlated with pulmonary hypertension progression, but the precise mechanism remains largely unclear.

Methods: MicroRNA-chip and real-time polymerase chain reaction were conducted to screen and validate microRNA profiles in blood plasma eEVs of rats and human with or without cigarette smoking. Pulmonary artery smooth muscle cells were cultured to study signaling pathways.

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Diabetes is a major risk factor for cardiovascular diseases, including diabetic cardiomyopathy, atherosclerosis, myocardial infarction, and heart failure. As cardiovascular disease represents the number one cause of death in people with diabetes, there has been a major emphasis on understanding the mechanisms by which diabetes promotes cardiovascular disease, and how antidiabetic therapies impact diabetic heart disease. With a wide array of models to study diabetes (both type 1 and type 2), the field has made major progress in answering these questions.

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Background: Pulmonary arterial hypertension is an incurable disease, in which the extracellular CaSR (calcium sensing receptor) is mechanistically important. This study was aimed to genetically link the gene and function to the disease severity.

Methods: Sanger sequencing, Sugen/hypoxia pulmonary arterial hypertension rat model, mutated rat, transcriptional reporter assay and measurement of CaSR activity were used.

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Fatty acid (FA) signaling contributes to β-cell mass expansion in response to nutrient excess, but the underlying mechanisms are poorly understood. In the presence of elevated glucose, FA metabolism is shifted toward synthesis of complex lipids, including sphingolipids. Here, we tested the hypothesis that sphingolipids are involved in the β-cell proliferative response to FA.

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Impairment in lymphatic transport is associated with the onset and progression of atherosclerosis in animal models. The downregulation of low-density-lipoprotein receptor (LDLR) expression, rather than increased circulating cholesterol level , is involved in early atherosclerosis-related lymphatic dysfunction. Enhancing lymphatic function in mice with a mutant form of VEGF-C (VEGF-C 152s), a selective VEGFR-3 agonist, successfully delayed atherosclerotic plaque onset when mice were subsequently fed a high-fat diet.

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Mouse models of genetic mitochondrial disorders are generally used to understand specific molecular defects and their biochemical consequences, but rarely to map compensatory changes allowing survival. Here we took advantage of the extraordinary mitochondrial resilience of hepatic Lrpprc knockout mice to explore this question using native proteomics profiling and lipidomics. In these mice, low levels of the mtRNA binding protein LRPPRC induce a global mitochondrial translation defect and a severe reduction (>80%) in the assembly and activity of the electron transport chain (ETC) complex IV (CIV).

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Untargeted metabolomics is used to refine the development of biomarkers for the diagnosis of cardiovascular disease. Myocardial infarction (MI) has major individual and societal consequences for patients, who remain at high risk of secondary events, despite advances in pharmacological therapy. To monitor their differential response to treatment, we performed untargeted plasma metabolomics on 175 patients from the platelet inhibition and patient outcomes (PLATO) trial treated with ticagrelor and clopidogrel, two common PY inhibitors.

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Defects in fatty acid (FA) utilization have been well described in group 1 pulmonary hypertension (PH) and in heart failure (HF), yet poorly studied in group 2 PH. This study was to assess whether the metabolomic profile of patients with pulmonary hypertension (PH) due HF, classified as group 2 PH, differs from those without PH. We conducted a proof-of-principle cross-sectional analysis of 60 patients with chronic HF with reduced ejection fraction and 72 healthy controls in which the circulating level of 71 energy-related metabolites was measured using various methods.

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