Publications by authors named "Matthieu Pluntz"

High-dimensional regression problems, for example with genomic or drug exposure data, typically involve automated selection of a sparse set of regressors. Penalized regression methods like the LASSO can deliver a family of candidate sparse models. To select one, there are criteria balancing log-likelihood and model size, the most common being AIC and BIC.

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In plant ecology, characterising colonisation and extinction in plant metapopulations is challenging due to the non-detectable seed bank that allows plants to emerge after several years of absence. In this study, we used a Hidden Markov Model to characterise seed dormancy, colonisation and germination solely from the presence-absence of standing flora. Applying the model to data from a long-term survey of 38 annual weeds across France, we identified three homogeneous functional groups: (1) species persisting preferentially through spatial colonisation, (2) species persisting preferentially through seed dormancy and (3) a mix of both strategies.

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