Publications by authors named "Matteo Delabre"
Algorithms Mol Biol
May 2020
Article Synopsis
- The classical gene and species tree reconciliation typically assumes that gene families evolve independently, which is valid for distant genes but not for those in syntenic blocks that may evolve together.
- The study introduces a challenge of deducing the history of segmental duplication and loss for neighboring genes, expanding the traditional Duplication-Loss reconciliation to accommodate multiple gene trees.
- The research demonstrates that reconstructing a most parsimonious Super-Reconciliation is NP-hard, offers an exponential-time algorithm to solve it, and presents a polynomial-time algorithm for a rearrangement-inclusive model focused on minimizing duplication and loss events.
