Publications by authors named "Martin Kopecky"

Biological nitrogen fixation is a fundamental part of ecosystem functioning. Anthropogenic nitrogen deposition and climate change may, however, limit the competitive advantage of nitrogen-fixing plants, leading to reduced relative diversity of nitrogen-fixing plants. Yet, assessments of changes of nitrogen-fixing plant long-term community diversity are rare.

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Article Synopsis
  • Climate change often leads to habitat shifts for species towards the poles, but other factors also play a significant role in determining species distribution.
  • A study on European forest plants shows that they are more likely to shift westward rather than northward, with westward movements being 2.6 times more common.
  • These shifts are primarily driven by nitrogen deposition and recovery from past pollution, indicating that biodiversity changes are influenced by multiple environmental factors, not just climate change alone.
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Soil moisture shapes ecological patterns and processes, but it is difficult to continuously measure soil moisture variability across the landscape. To overcome these limitations, soil moisture is often bioindicated using community-weighted means of the Ellenberg indicator values of vascular plant species. However, the ecology and distribution of plant species reflect soil water supply as well as atmospheric water demand.

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Dot-blot immunoassays are widely used for the user-friendly detection of clinical biomarkers. However, the majority of dot-blot assays have only limited sensitivity and are only used for qualitative or semiquantitative analysis. To overcome this limitation, we have employed labels based on photon-upconversion nanoparticles (UCNPs) that exhibit anti-Stokes luminescence and can be detected without optical background interference.

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Biodiversity world-wide has been under increasing anthropogenic pressure in the past century. The long-term response of biotic communities has been tackled primarily by focusing on species richness, community composition and functionality. Equally important are shifts between entire communities and habitat types, which remain an unexplored level of biodiversity change.

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Background And Aims: Understanding biomass allocation among plant organs is crucial for comprehending plant growth optimization, survival and responses to the drivers of global change. Yet, the mechanisms governing mass allocation in vascular plants from extreme elevations exposed to cold and drought stresses remain poorly understood.

Methodology: We analysed organ mass weights and fractions in 258 Himalayan herbaceous species across diverse habitats (wetland, steppe, alpine), growth forms (annual, perennial taprooted, rhizomatous and cushiony) and climatic gradients (3500-6150 m elevation) to explore whether biomass distribution adhered to fixed allometric or optimal partitioning rules, and how variations in size, phylogeny and ecological preferences influence their strategies for resource allocation.

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Plant communities are being exposed to changing environmental conditions all around the globe, leading to alterations in plant diversity, community composition, and ecosystem functioning. For herbaceous understorey communities in temperate forests, responses to global change are postulated to be complex, due to the presence of a tree layer that modulates understorey responses to external pressures such as climate change and changes in atmospheric nitrogen deposition rates. Multiple investigative approaches have been put forward as tools to detect, quantify and predict understorey responses to these global-change drivers, including, among others, distributed resurvey studies and manipulative experiments.

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Temperature is a fundamental driver of species distribution and ecosystem functioning. Yet, our knowledge of the microclimatic conditions experienced by organisms inside tropical forests remains limited. This is because ecological studies often rely on coarse-gridded temperature estimates representing the conditions at 2 m height in an open-air environment (i.

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  • Global change has led to notable shifts in plant species within European temperate forests, resulting in both losses and gains of unique evolutionary lineages.
  • The study analyzed 2672 vegetation plots over 40 years, finding that while overall phylogenetic diversity (PD) increased slightly, species lost were more closely related than those gained, suggesting that new species come from a wider range of lineages.
  • Specific plant families like Ericaceae and Fabaceae experienced significant losses, while Amaranthaceae and Rosaceae showed gains, but overall trends in species changes were not strongly linked to larger climatic or nitrogen conditions.
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Species distributions are conventionally modelled using coarse-grained macroclimate data measured in open areas, potentially leading to biased predictions since most terrestrial species reside in the shade of trees. For forest plant species across Europe, we compared conventional macroclimate-based species distribution models (SDMs) with models corrected for forest microclimate buffering. We show that microclimate-based SDMs at high spatial resolution outperformed models using macroclimate and microclimate data at coarser resolution.

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Arbuscular mycorrhizal (AM) fungi can benefit plants under environmental stress, and influence plant adaptation to warmer climates. However, very little is known about the ecology of these fungi in alpine environments. We sampled plant roots along a large fraction (1941-6150 m asl (above sea level)) of the longest terrestrial elevational gradient on Earth and used DNA metabarcoding to identify AM fungi.

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Microclimate research gained renewed interest over the last decade and its importance for many ecological processes is increasingly being recognized. Consequently, the call for high-resolution microclimatic temperature grids across broad spatial extents is becoming more pressing to improve ecological models. Here, we provide a new set of open-access bioclimatic variables for microclimate temperatures of European forests at 25 × 25 m resolution.

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Ungulate populations are increasing across Europe with important implications for forest plant communities. Concurrently, atmospheric nitrogen (N) deposition continues to eutrophicate forests, threatening many rare, often more nutrient-efficient, plant species. These pressures may critically interact to shape biodiversity as in grassland and tundra systems, yet any potential interactions in forests remain poorly understood.

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Increasingly available high-resolution digital elevation models (DEMs) facilitate the use of fine-scale topographic variables as proxies for microclimatic effects not captured by the coarse-grained macroclimate datasets. Species distributions and community assembly rules are, however directly shaped by microclimate and not by topography. DEM-derived topography, sometimes combined with vegetation structure, is thus widely used as a proxy for microclimatic effects in ecological research and conservation applications.

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  • Research discusses how current global climate models are based on air temperatures but fail to capture the soil temperatures beneath vegetation where many species thrive.
  • New global maps present soil temperature and bioclimatic variables at 1-km resolution for specific depths, revealing that mean annual soil temperatures can differ significantly from air temperatures by up to 10°C.
  • The findings indicate that relying on air temperature could misrepresent climate impacts on ecosystems, especially in colder regions, highlighting the need for more precise soil temperature data for ecological studies.
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Species turnover is ubiquitous. However, it remains unknown whether certain types of species are consistently gained or lost across different habitats. Here, we analysed the trajectories of 1827 plant species over time intervals of up to 78 years at 141 sites across mountain summits, forests, and lowland grasslands in Europe.

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Ecological research heavily relies on coarse-gridded climate data based on standardized temperature measurements recorded at 2 m height in open landscapes. However, many organisms experience environmental conditions that differ substantially from those captured by these macroclimatic (i.e.

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Schall and Heinrichs question our interpretation that the climatic debt in understory plant communities is locally modulated by canopy buffering. However, our results clearly show that the discrepancy between microclimate warming rates and thermophilization rates is highest in forests where canopy cover was reduced, which suggests that the need for communities to respond to warming is highest in those forests.

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Bertrand question our interpretation about warming effects on the thermophilization in forest plant communities and propose an alternative way to analyze climatic debt. We show that microclimate warming is a better predictor than macroclimate warming for studying forest plant community responses to warming. Their additional analyses do not affect or change our interpretations and conclusions.

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Soil moisture controls environmental processes and species distributions, but it is difficult to measure and interpolate across space. Topographic Wetness Index (TWI) derived from digital elevation model is therefore often used as a proxy for soil moisture. However, different algorithms can be used to calculate TWI and this potentially affects TWI relationship with soil moisture and species assemblages.

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Climate warming is causing a shift in biological communities in favor of warm-affinity species (i.e., thermophilization).

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Current analyses and predictions of spatially explicit patterns and processes in ecology most often rely on climate data interpolated from standardized weather stations. This interpolated climate data represents long-term average thermal conditions at coarse spatial resolutions only. Hence, many climate-forcing factors that operate at fine spatiotemporal resolutions are overlooked.

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Article Synopsis
  • Biodiversity is shifting globally, with local species richness remaining stable even as some species are lost and others are introduced.
  • Small-range herb-layer species are being replaced by more widespread, nitrogen-demanding species, influenced by nitrogen deposition rather than species abundance.
  • While individual study sites may not show a loss in species richness, the decline of small-ranged species contributes to reduced overall biodiversity (gamma diversity) across larger regions.
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Aim: Forest understorey microclimates are often buffered against extreme heat or cold, with important implications for the organisms living in these environments. We quantified seasonal effects of understorey microclimate predictors describing canopy structure, canopy composition and topography (i.e.

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  • - The study investigates the factors influencing the distribution of fungi worldwide by analyzing a large dataset of mycobiome data linked to specific geographical locations.
  • - It highlights that climate is a major factor impacting fungal biogeography, affecting the distribution, composition, and diversity of fungal communities, with a surprising concentration of diversity in high latitudes compared to other organisms.
  • - The research suggests that mycorrhizal fungi have stricter climate tolerances than pathogenic fungi, raising concerns that climate change may disrupt ecosystem functions due to these narrow tolerances in important fungal groups.
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