Publications by authors named "Maria Farooq"

This study examines the efficacy and safety of condoliase chemonucleolysis (CC) in treating lumbar disc herniation (LDH) and highlights emerging alternatives like chondroitin sulfate ABC endolyase. Research indicates that condoliase, an enzyme used to degrade glycosaminoglycans in the nucleus pulposus, provides effective and prompt relief of leg pain, with significant reductions observed within a day of treatment. Studies reveal that a lower pretreatment straight leg raising (SLR) angle may predict early symptom relief, and condoliase is generally effective at doses up to 1.

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Sarcoidosis, a systemic granulomatous disease primarily affecting the respiratory and lymphatic systems, can rarely manifest as neurosarcoidosis either in isolation or alongside other systemic symptoms. Here, we describe the case of a 45-year-old male with a history of recurrent sinusitis refractory to antibiotics, who presented to the emergency department with sinus congestion and dysphagia. Clinical examination revealed left lower motor neuron facial palsy and enlarged submandibular salivary glands.

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The early detection of cancer is a key goal of the National Cancer Plan formally released by the National Institutes of Health's (NIH) National Cancer Institute (NCI) in April 2023. To support this effort, many laboratories and vendors are developing multi-cancer detection (MCD) assays that interrogate blood and other bodily fluids for cancer-related biomarkers, most commonly circulating tumor DNA (ctDNA). While this approach holds promise for non-invasively detecting early signals of multiple different cancers and potentially reducing cancer-related mortality, there is a dearth of prospective clinical data to inform the deployment of MCD assays for cancer screening in the general adult population.

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Article Synopsis
  • Genome-wide fragmentation patterns of cell-free DNA (cfDNA) in plasma are influenced by the cellular origin, which varies between healthy and cancerous cells, presenting an opportunity for new cancer diagnostics.
  • The study analyzed cfDNA from 2,668 samples, including those from healthy individuals and patients with 11 different cancer types, using a novel metric called information-weighted fraction of aberrant fragments (iwFAF) to identify tumor-derived DNA in blood samples.
  • A machine learning model was developed using iwFAF and specific nucleotide frequencies, achieving a high accuracy in distinguishing between healthy and cancer patients, with an AUC of 0.91 for any cancer stage and 0.87 for early-stage detection, while requiring only
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Lung cancer remains the leading cause of cancer deaths in the United States and the world. Early detection of this disease can reduce mortality, as demonstrated for low-dose computed tomography (LDCT) screening. However, there remains a need for improvements in lung cancer detection to complement LDCT screening and to increase adoption of screening.

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Article Synopsis
  • Longitudinal analysis of circulating tumor DNA (ctDNA) highlights challenges in detecting residual disease in nonmetastatic cancer post-treatment, prompting the development of a more sensitive method called targeted digital sequencing (TARDIS).
  • TARDIS can analyze multiple patient-specific cancer mutations simultaneously, achieving 91% sensitivity and 96% specificity with just a blood sample, allowing for better monitoring of treatment responses in breast cancer patients.
  • The study found that TARDIS effectively identified lower ctDNA concentrations in patients achieving complete response after neoadjuvant therapy compared to those with residual disease, suggesting its potential for personalized cancer management.
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Pre-analytical factors can significantly affect circulating cell-free DNA (cfDNA) analysis. However, there are few robust methods to rapidly assess sample quality and the impact of pre-analytical processing. To address this gap and to evaluate effects of DNA extraction methods and blood collection tubes on cfDNA yield and fragment size, we developed a multiplexed droplet digital PCR (ddPCR) assay with 5 short and 4 long amplicons targeting single copy genomic loci.

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Acanthamoeba is an opportunistic protist pathogen that is responsible for serious human and animal infection. Being one of the most frequently isolated protists from the environment, it is likely that it readily encounters microaerophilic environments. For respiration under anaerobic or low oxygen conditions in several amitochondriate protists, decarboxylation of pyruvate is catalyzed by pyruvate ferredoxin oxidoreductase instead of pyruvate dehydrogenase.

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Background: Preoperative steroid use has been associated with increased postoperative complications. We sought to establish these risks using data from the National Surgical Quality Improvement Program (NSQIP).

Methods: NSQIP public use files from 2005 to 2008 were analyzed for preoperative steroid use and postoperative adverse events.

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As medicine becomes increasingly data driven, caregivers are required to collect and analyze an increasingly copious volume of patient data. Although methods for studying these data have recently evolved, the collection of clinically validated data remains cumbersome. We explored how to reduce the amount of data needed to risk stratify patients.

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Raloxifene, a selective estrogen receptor modulator, is indicated for the prevention of osteoporosis in postmenopausal women. However, its effect on the risk of deep venous thrombosis (DVT) and pulmonary embolism (PE) is unclear. Therefore, we conducted a meta-analysis to evaluate the effect of raloxifene on these outcomes.

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