Anaerobic digestion is a crucial process for treating organic waste, such as wastewater sludge, agricultural residues and food waste. While the influence of physicochemical parameters on the prokaryotic community composition in anaerobic digesters has been extensively characterized, the role of biotic interactions in shaping the prokaryotic communities remains poorly understood. This study addresses this knowledge gap by analyzing the complete active microbiome of nine full-scale anaerobic digesters.
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