Publications by authors named "Maria A van Santen"

Alternative pre-mRNA splicing is a central element of eukaryotic gene expression. Its deregulation can lead to disease, and methods to change splice site selection are developed as potential therapies. Spinal muscular atrophy is caused by the loss of the SMN1 (survival of motoneuron 1) gene.

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Article Synopsis
  • Reversible protein modification by SUMOs is essential for eukaryotic life, and mass spectrometry has effectively identified many potential SUMO target proteins.
  • A new method was developed to identify SUMO acceptor lysines in target proteins, leading to the identification of 103 SUMO-2 acceptor lysines.
  • The study revealed differences in SUMOylation motifs, highlighted the interaction between SUMOylation and phosphorylation, and identified a specific hydrophobic cluster motif that enhances the efficiency of SUMO conjugation in certain proteins.
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Abundance of pseudo splice sites in introns can potentially give rise to innumerable pseudoexons, outnumbering the real ones. Nonetheless, these are efficiently ignored by the splicing machinery, a process yet to be understood completely. Although numerous 5' splice site-like sequences functioning as splicing silencers have been found to be enriched in predicted human pseudoexons, the lack of active pseudoexons pose a fundamental challenge to how these U1snRNP-binding sites function in splicing inhibition.

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The removal of intervening sequences from a primary RNA transcript is catalyzed by the spliceosome, a large complex consisting of five small nuclear (sn) RNAs and more than 150 proteins. At the start of the splicing cycle, the spliceosome assembles anew onto each pre-mRNA intron in an ordered process. Here, we show that several small-molecule inhibitors of protein acetylation/deacetylation block the splicing cycle: by testing a small number of bioactive compounds, we found that three small-molecule inhibitors of histone acetyltransferases (HATs), as well as three small-molecule inhibitors of histone deacetylases (HDACs), block pre-mRNA splicing in vitro.

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