Publications by authors named "Marcus Bage"

Article Synopsis
  • The text outlines the importance of archiving and sharing protein and nucleic acid structures for supporting research in life sciences.
  • It highlights the role of the Protein Data Bank in Europe (PDBe) in developing databases and web services to provide access to structural data, annotations, and visualization tools.
  • The document also discusses future directions for PDBe's services to address challenges posed by advancements in structure determination and modeling.
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Recruitment of the mRNA capping enzyme (CE/RNGTT) to the site of transcription is essential for the formation of the 5' mRNA cap, which in turn ensures efficient transcription, splicing, polyadenylation, nuclear export and translation of mRNA in eukaryotic cells. The CE GTase is recruited and activated by the Serine-5 phosphorylated carboxyl-terminal domain (CTD) of RNA polymerase II. Through the use of molecular dynamics simulations and enhanced sampling techniques, we provide a systematic and detailed characterization of the human CE-CTD interface, describing the effect of the CTD phosphorylation state, length and orientation on this interaction.

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The transport of charged molecules across biological membranes faces the dual problem of accommodating charges in a highly hydrophobic environment while maintaining selective substrate translocation. This has been the subject of a particular controversy for the exchange of ammonium across cellular membranes, an essential process in all domains of life. Ammonium transport is mediated by the ubiquitous Amt/Mep/Rh transporters that includes the human Rhesus factors.

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