Publications by authors named "Marcelle Tuttle"

Introduction: Although venous congestion secondary to elevated pulmonary artery pressure (PAP) has been hypothesized to worsen kidney function, the association of peak tricuspid regurgitation jet velocity (pTRV), a surrogate of PAP, with kidney outcomes remains uncertain in heart failure (HF) with preserved ejection fraction (HFpEF).

Methods: This analysis of the Treatment of Preserved Cardiac Function Heart Failure with an Aldosterone Antagonist (TOPCAT) trial analyzed participants with a left ventricular ejection fraction (LVEF) of ≥45% who had pTRV measured by echocardiography at baseline. For the cross-sectional analysis, the association of baseline pTRV with baseline estimated glomerular filtration rate (eGFR) was assessed using linear regression.

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Plasma or urinary clearance of exogenous filtration markers is required for assessment of measured glomerular filtration rate. Although multiple methods are available, none is widely used because of their complexity, each has measurement error, and standardization is limited. Recently, a study validated the plasma clearance of a new exogenous filtration marker, relmapirazin, which can be detected by its transdermal fluorescence, potentially simplifying the procedure and increasing access to measured glomerular filtration rate.

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Article Synopsis
  • Pulmonary hypertension is a prevalent issue for individuals with chronic kidney disease (CKD), but there are few effective treatment options available.
  • Recent updates to the definition of pulmonary hypertension mean more CKD patients may now be diagnosed with the condition, while new medications like endothelin receptor antagonists and sotatercept show promise but need further research.
  • Overall, a better understanding of pulmonary hypertension in CKD exists, but there’s a critical need for larger studies to evaluate targeted therapies for this population.
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Heart failure with preserved ejection fraction (HFpEF) comprises approximately one-half of all diagnoses of heart failure. There is significant overlap of this clinical syndrome with chronic kidney disease (CKD), with many shared comorbid conditions. The presence of CKD in patients with HFpEF is one of the most powerful risk factors for adverse clinical outcomes, including death and heart failure hospitalization.

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The RNA-guided endonuclease Cas9 can be converted into a programmable transcriptional repressor, but inefficiencies in target-gene silencing have limited its utility. Here we describe an improved Cas9 repressor based on the C-terminal fusion of a rationally designed bipartite repressor domain, KRAB-MeCP2, to nuclease-dead Cas9. We demonstrate the system's superiority in silencing coding and noncoding genes, simultaneously repressing a series of target genes, improving the results of single and dual guide RNA library screens, and enabling new architectures of synthetic genetic circuits.

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Here, we present a generalized method of guide RNA "tuning" that enables Cas9 to discriminate between two target sites that differ by a single-nucleotide polymorphism. We employ our methodology to generate an in vivo mutation prevention system in which Cas9 actively restricts the occurrence of undesired gain-of-function mutations within a population of engineered organisms. We further demonstrate that the system is scalable to a multitude of targets and that the general tuning and prevention concepts are portable across engineered Cas9 variants and Cas9 orthologs.

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Clustered regularly interspaced short palindromic repeats (CRISPRs) and CRISPR-associated (Cas) proteins offer a breakthrough platform for cheap, programmable, and effective sequence-specific DNA targeting. The CRISPR-Cas system is naturally equipped for targeted DNA cutting through its native nuclease activity. As such, groups researching a broad spectrum of biological organisms have quickly adopted the technology with groundbreaking applications to genomic sequence editing in over 20 different species.

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Article Synopsis
  • The study focuses on comparing different Cas9-based transcription factor systems to see how effective they are at activating gene expression in various cell types, including human, mouse, and fly cells.
  • Researchers aim to uncover which systems are the most powerful and if combining top activators can enhance gene expression further.
  • The investigation also looks into how cooperative interactions between activators contribute to maximizing the level of gene expression achieved.
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We demonstrate that by altering the length of Cas9-associated guide RNA (gRNA) we were able to control Cas9 nuclease activity and simultaneously perform genome editing and transcriptional regulation with a single Cas9 protein. We exploited these principles to engineer mammalian synthetic circuits with combined transcriptional regulation and kill functions governed by a single multifunctional Cas9 protein.

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Article Synopsis
  • The Cas9 protein, originally a nuclease, can be modified to act as a programmable transcription factor, although its initial effectiveness for gene activation was limited.
  • Researchers developed a more effective transcriptional regulator by combining a designed tripartite activator called VPR with a modified, non-nuclease version of Cas9.
  • This new regulator successfully activates both coding and noncoding genes, allows for simultaneous targeting of multiple genes, and promotes the differentiation of human induced pluripotent stem cells into neurons.
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