Zonation of the active methane-cycling community in deep subsurface sediments of the Peru trench.

The production and anaerobic oxidation of methane (AOM) by microorganisms is widespread in organic-rich deep subseafloor sediments. Yet, the organisms that carry out these processes remain largely unknown. Here we identify members of the methane-cycling microbial community in deep subsurface, hydrate-containing sediments of the Peru Trench by targeting functional genes of the alpha subunit of methyl coenzyme M reductase ().

The efficacy of Phoslock® in reducing internal phosphate loading varies with bottom water oxygenation.

Eutrophication in lakes and reservoirs has prompted interest in using sediment capping technology to reduce the sediment contribution to internal nutrient loading. One such sediment capping technology is Phoslock®, a lanthanum-embedded clay, which can bind phosphate at the sediment surface and limit its diffusion into the water column. However, in well-oxygenated lakes, naturally occurring iron can bind phosphate by a similar mechanism.

Kinetics and Identities of Extracellular Peptidases in Subsurface Sediments of the White Oak River Estuary, North Carolina.

Anoxic subsurface sediments contain communities of heterotrophic microorganisms that metabolize organic carbon at extraordinarily low rates. In order to assess the mechanisms by which subsurface microorganisms access detrital sedimentary organic matter, we measured kinetics of a range of extracellular peptidases in anoxic sediments of the White Oak River Estuary, NC. Nine distinct peptidase substrates were enzymatically hydrolyzed at all depths.

Organic carbon inventories in natural and restored Ecuadorian mangrove forests.

Mangroves can capture and store organic carbon and their protection and therefore their restoration is a component of climate change mitigation. However, there are few empirical measurements of long-term carbon storage in mangroves or of how storage varies across environmental gradients. The context dependency of this process combined with geographically limited field sampling has made it difficult to generalize regional and global rates of mangrove carbon sequestration.

Environmental evidence for net methane production and oxidation in putative ANaerobic MEthanotrophic (ANME) archaea.

Uncultured ANaerobic MEthanotrophic (ANME) archaea are often assumed to be obligate methanotrophs that are incapable of net methanogenesis, and are therefore used as proxies for anaerobic methane oxidation in many environments in spite of uncertainty regarding their metabolic capabilities. Anaerobic methane oxidation regulates methane emissions in marine sediments and appears to occur through a reversal of a methane-producing metabolism. We tested the assumption that ANME are obligate methanotrophs by detecting and quantifying gene transcription of ANME-1 across zones of methane oxidation versus methane production in sediments from the White Oak River estuary, North Carolina.

Comparative ecology of H2 cycling in sedimentary and phototrophic ecosystems.

The simple biochemistry of H2 is critical to a large number of microbial processes, affecting the interaction of organisms with each other and with the environment. The sensitivity of each of these processes to H2 can be described collectively, through the quantitative language of thermodynamics. A necessary prerequisite is to understand the factors that, in turn, control H2 partial pressures.