Publications by authors named "Mara Lanis"

Antigen-presenting cells (APCs), such as dendritic cells and macrophages, have a unique ability to survey the body and present information to T cells via peptide-loaded major histocompatibility complexes (signal 1). This presentation, along with a co-stimulatory signal (signal 2), leads to activation and subsequent expansion of T cells. This process can be harnessed and utilized for therapeutic applications, but the use of patient-derived APCs can be complex and inefficient.

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T cells are critical mediators of antigen-specific immune responses and are common targets for immunotherapy. Biomaterial scaffolds have previously been used to stimulate antigen-presenting cells to elicit antigen-specific immune responses; however, structural and molecular features that directly stimulate and expand naïve, endogenous, tumor-specific T cells in vivo have not been defined. Here, an artificial lymph node (aLN) matrix is created, which consists of an extracellular matrix hydrogel conjugated with peptide-loaded-MHC complex (Signal 1), the co-stimulatory signal anti-CD28 (Signal 2), and a tethered IL-2 (Signal 3), that can bypass challenges faced by other approaches to activate T cells in situ such as vaccines.

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Article Synopsis
  • - Stereotactic ablative body radiation (SABR) shows promise for treating early-stage non-small cell lung cancer (NSCLC), with 83% of patients remaining alive without tumor progression at a median follow-up of 40 months.
  • - The study examined the immune and pathological effects of SABR by analyzing blood and tumor biopsies from six patients before and after treatment, focusing on immune-cell populations and T-cell receptor changes.
  • - While early post-SABR biopsies revealed viable tumors and maintained immune-cell populations, a subset of patients exhibited a temporary increase in neoantigen-specific T-cells after treatment, suggesting that SABR can provoke a delayed immune response.
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Mesothelioma is a rare and fatal cancer with limited therapeutic options until the recent approval of combination immune checkpoint blockade. Here we report the results of the phase 2 PrE0505 trial ( NCT02899195 ) of the anti-PD-L1 antibody durvalumab plus platinum-pemetrexed chemotherapy for 55 patients with previously untreated, unresectable pleural mesothelioma. The primary endpoint was overall survival compared to historical control with cisplatin and pemetrexed chemotherapy; secondary and exploratory endpoints included safety, progression-free survival and biomarkers of response.

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PD-1 blockade unleashes CD8 T cells, including those specific for mutation-associated neoantigens (MANA), but factors in the tumour microenvironment can inhibit these T cell responses. Single-cell transcriptomics have revealed global T cell dysfunction programs in tumour-infiltrating lymphocytes (TIL). However, the majority of TIL do not recognize tumour antigens, and little is known about transcriptional programs of MANA-specific TIL.

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Despite progress in immunotherapy, identifying patients that respond has remained a challenge. Through analysis of whole-exome and targeted sequence data from 5,449 tumors, we found a significant correlation between tumor mutation burden (TMB) and tumor purity, suggesting that low tumor purity tumors are likely to have inaccurate TMB estimates. We developed a new method to estimate a corrected TMB (cTMB) that was adjusted for tumor purity and more accurately predicted outcome to immune checkpoint blockade (ICB).

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Article Synopsis
  • The study investigated the safety and feasibility of using neoadjuvant nivolumab (a PD-1 inhibitor) plus ipilimumab (an anti-CTLA-4 agent) in patients with resectable non-small cell lung cancer (NSCLC), following earlier promising results with nivolumab alone.
  • Out of 15 patients planned for enrollment, the study was stopped early after 9 patients due to high rates of treatment-related adverse events, with 67% experiencing some form of toxicity and 33% having severe reactions.
  • Of the 6 patients who proceeded to surgery, 2 achieved complete tumor response and remained disease-free for over 2 years, indicating potential effectiveness, although there was an observed correlation
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Fast, robust, nondestructive 3D imaging is needed for the characterization of microscopic tissue structures across various clinical applications. A custom microelectromechanical system (MEMS)-based 2D scanner was developed to achieve, together with a multi-level GPU architecture, 55 kHz fast-axis A-scan acquisition in a Gabor-domain optical coherence microscopy (GD-OCM) custom instrument. GD-OCM yields high-definition micrometer-class volumetric images.

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