Publications by authors named "Makela J"

Defining the cellular factors that drive growth rate and proteome composition is essential for understanding and manipulating cellular systems. In bacteria, ribosome concentration is known to be a constraining factor of cell growth rate, while gene concentration is usually assumed not to be limiting. Here, using single-molecule tracking, quantitative single-cell microscopy, and modeling, we show that genome dilution in cells arrested for DNA replication limits total RNA polymerase activity within physiological cell sizes across tested nutrient conditions.

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This proof-of-concept study explores quantitative imaging of articular cartilage using photon-counting detector computed tomography (PCD-CT) with a dual-contrast agent approach, comparing it to clinical dual-energy CT (DECT). The diffusion of cationic iodinated CA4 + and non-ionic gadolinium-based gadoteridol contrast agents into ex vivo bovine medial tibial plateau cartilage was tracked over 72 h. Continuous maps of the contrast agents' diffusion were created, and correlations with biomechanical indentation parameters (equilibrium and instantaneous moduli, and relaxation time constants) were examined at 28 specific locations.

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  • Age-related macular degeneration (AMD) is a common cause of vision loss among older adults, and current treatment options are limited.
  • Researchers identified genetic factors contributing to AMD risk by analyzing data from 12,495 AMD cases and 461,686 controls, discovering four key protective haplotypes.
  • The study suggests that lowering levels of the protein FHR-5 could enhance certain immune pathways and potentially serve as a strategy to prevent or treat AMD.
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Site-specific differences in the compressive properties of tibiofemoral joint articular cartilage are well-documented, while exploration of tensile and frictional properties in humans remains limited. Thus, this study aimed to characterize and compare the tensile, compressive and frictional properties of articular cartilage across different sites of the tibiofemoral joint, and to establish relationships between these properties and cartilage degeneration. We cut human tibiofemoral joint (N = 5) cartilage surfaces into tensile testing samples (n = 155) and osteochondral plugs (n = 40) to determine the tensile, friction and compressive properties, as well as OARSI grades.

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Background: Imatinib and dasatinib are tyrosine kinase inhibitors (TKIs) increasingly used to treat several diseases in both children and adults at fertile age. We have previously shown that imatinib has adverse effects on developing testis, and imatinib-treated male patients have been reported to have reduced sperm counts. However, the cellular level effects of imatinib and dasatinib on adult male germ cells and germline stem cells (mGSCs) have not been thoroughly investigated.

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  • Paired associative stimulation (PAS) combines transcranial magnetic stimulation (TMS) and peripheral nerve stimulation (PNS) to enhance motor-evoked potentials (MEPs) and promote spinal plasticity, particularly beneficial for rehabilitation after spinal cord injury (SCI).
  • A new high-frequency variant of PAS, called "high-PAS," was tested alongside noninvasive auricular vagus nerve stimulation (aVNS) to see if it could further boost MEP enhancement.
  • While PAS significantly improved MEPs compared to aVNS alone, the combined effects did not yield significant results, indicating that more optimization of the aVNS setup is needed for potential use in SCI patients.
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The ability of articular cartilage to withstand significant mechanical stresses during activities, such as walking or running, relies on its distinctive structure. Integrating detailed tissue properties into subject-specific biomechanical models is challenging due to the complexity of analyzing these characteristics. This limitation compromises the accuracy of models in replicating cartilage function and impacts predictive capabilities.

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  • Cancer cells experience significant changes in gene expression and epigenetics, including the abnormal activation of certain tissue-specific genes.
  • The RNA helicase DDX4 forms structures similar to germ granules in tumors but not in cultured cancer cells, containing proteins linked to RNA and splicing.
  • The absence of DDX4 in cancer cells alters gene expression, reduces cancer growth and invasiveness, and is associated with poorer patient outcomes in certain cancers like head and neck squamous cell carcinoma and advanced prostate cancer.
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  • Joint kinematic instability, whether congenital or due to other health factors, leads to cartilage damage and progression to osteoarthritis (OA), which affects joint function.
  • OA reduces the effectiveness of synovial fluid lubrication, primarily due to the loss of important components like hyaluronic acid.
  • Viscosupplementation and advanced biomimetic strategies are being explored to improve joint lubrication and minimize cartilage wear, though results vary and effectiveness can be limited.
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Hydroxysteroid (17β) dehydrogenase (HSD17B) enzymes convert 17-ketosteroids to 17beta-hydroxysteroids, an essential step in testosterone biosynthesis. Human XY individuals with inactivating HSD17B3 mutations are born with female-appearing external genitalia due to testosterone deficiency. However, at puberty their testosterone production reactivates, indicating HSD17B3-independent testosterone synthesis.

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Cationic contrast-enhanced computed tomography (CECT) capitalizes on increased contrast agent affinity to the charged proteoglycans in articular cartilage matrix to provide quantitative assessment of proteoglycan content with enhanced images. While high resolution microCT has demonstrated success, we investigate cationic CECT use in longitudinal in vivo imaging at clinical resolution. We hypothesize that repeated administration of CA4+ will have no adverse side effects or complications, and that sequential in vivo imaging assessments will distinguish articular cartilage repair tissue from early degenerative and healthy cartilage in critically sized chondral defects.

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Strongly attractive forces act between superhydrophobic surfaces across water due to the formation of a bridging gas capillary. Upon separation, the attraction can range up to tens of micrometers as the gas capillary grows, while gas molecules accumulate in the capillary. We argue that most of these molecules come from the pre-existing gaseous layer found at and within the superhydrophobic coating.

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The clinical spectrum of thyrotropin receptor-mediated (TSHR-mediated) diseases varies from loss-of-function mutations causing congenital hypothyroidism to constitutively active mutations (CAMs) leading to nonautoimmune hyperthyroidism (NAH). Variation at the TSHR locus has also been associated with altered lipid and bone metabolism and autoimmune thyroid diseases. However, the extrathyroidal roles of TSHR and the mechanisms underlying phenotypic variability among TSHR-mediated diseases remain unclear.

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There exists a need for new methods to address treatment anxiety in pediatrics-at the same time, deep breathing exercises and virtual natural environments have both been known to have stress-reducing qualities. This article reports the combined effect of these two methods in a pediatric setting. A feasibility study was conducted in a local hospital.

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Treatment anxiety is a serious problem among child patients. A few studies have addressed this issue with virtual reality solutions, with promising results; however, the applications used have generally been designed for entertainment instead of this purpose. This article studies the potential of using deep breathing exercises in a virtual natural environment to address this issue, with a focus on design approach and user experience.

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Objective: Cationic tantalum oxide nanoparticles (TaO-cNPs), as a newly introduced contrast agent for computed tomography of cartilage, offer quantitative evaluation of proteoglycan (PG) content and biomechanical properties. However, knowledge on the depth-wise impact of cartilage constituents on nanoparticle diffusion, particularly the influence of the collagen network, is lacking. In this study, we aim to establish the depth-dependent relationship between TaO-cNP diffusion and cartilage constituents (PG content, collagen content and network architecture).

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Cartilage and synovial fluid are challenging to observe separately in native computed tomography (CT). We report the use of triple contrast agent (bismuth nanoparticles [BiNPs], CA4+, and gadoteridol) to image and segment cartilage in cadaveric knee joints with a clinical CT scanner. We hypothesize that BiNPs will remain in synovial fluid while the CA4+ and gadoteridol will diffuse into cartilage, allowing (1) segmentation of cartilage, and (2) evaluation of cartilage biomechanical properties based on contrast agent concentrations.

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  • The NASA Ionospheric Connection Explorer (ICON) completed its two-year mission, successfully achieving and exceeding its scientific goals.
  • Launched in October 2019, ICON measures plasma density in Earth's space environment, providing valuable insights into the ionosphere-thermosphere system.
  • During its mission, ICON identified significant effects in the ionosphere influenced by atmospheric conditions and observed shifts in these influences as solar activity changed over time.
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Background: Strategies for articular cartilage repair need to take into account topographical differences in tissue composition and architecture to achieve durable functional outcome. These have not yet been investigated in the equine stifle.

Objectives: To analyse the biochemical composition and architecture of three differently loaded areas of the equine stifle.

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Osteoarthritis degenerates cartilage and impairs joint function. Early intervention opportunities are missed as current diagnostic methods are insensitive to early tissue degeneration. We investigated the capability of visible light-near-infrared spectroscopy (Vis-NIRS) to differentiate normal human cartilage from early osteoarthritic one.

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The aim of this study is to assess whether articular cartilage changes in an equine model of post-traumatic osteoarthritis (PTOA), induced by surgical creation of standard (blunt) grooves, and very subtle sharp grooves, could be detected with ex vivo T relaxation time mapping utilizing three-dimensional (3D) readout sequence with zero echo time. Grooves were made on the articular surfaces of the middle carpal and radiocarpal joints of nine mature Shetland ponies and osteochondral samples were harvested at 39 weeks after being euthanized under respective ethical permissions. T relaxation times of the samples (n = 8 + 8 for experimental and n = 12 for contralateral controls) were measured with a variable flip angle 3D multiband-sweep imaging with Fourier transform sequence.

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The formation of a bridging gas capillary between superhydrophobic surfaces in water gives rise to strongly attractive interactions ranging up to several micrometers on separation. However, most liquids used in materials research are oil-based or contain surfactants. Superamphiphobic surfaces repel both water and low-surface-tension liquids.

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The design, principles of operation, calibration, and data analysis approaches of the Michelson Interferometer for Global High-resolution Thermospheric Imaging (MIGHTI) on the NASA Ionospheric Connection (ICON) satellite have been documented prior to the ICON launch. Here we update and expand on the MIGHTI wind data analysis and discuss the on-orbit instrument performance. In particular, we show typical raw data and we describe key processing steps, including the correction of a "signal-intensity dependent phase shift," which is necessitated by unexpected detector behavior.

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  • Accurate preoperative mapping of language areas is essential for surgeries involving brain tumors or epilepsy, aiding in planning and reducing risks.
  • While invasive methods like direct cortical stimulation (DCS) are used to identify critical speech areas, non-invasive techniques such as MRI, fMRI, MEG, and PET offer alternative options for patients who cannot undergo awake surgeries.
  • The outlined protocol for non-invasive speech cortical mapping using repetitive transcranial magnetic stimulation (rTMS) and neuronavigation (nrTMS) allows for precise localization of speech-related functions and can adapt to individual patient needs.
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