Active vitamin D, 1α,25(OH)D, is a nuclear hormone with roles in colonic homeostasis and carcinogenesis; yet, mechanisms underlying these effects are incompletely understood. Human organoids are an ideal system to study genomic and epigenomic host-environment interactions. Here, we use human colonic organoids to measure 1α,25(OH)D responses on genome-wide gene expression and chromatin accessibility over time.
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