Publications by authors named "Maarten Ryder"

Article Synopsis
  • Fusarium crown rot and wheat sharp eyespot are significant soil-borne diseases affecting wheat production in China, leading to substantial yield losses.
  • High-throughput sequencing and qPCR were used to analyze the impact of treating winter wheat seeds with either Trichoderma atroviride HB20111 or a chemical fungicide (tebuconazole) on the fungal community in the soil, showing that both treatments effectively reduced the harmful pathogen Fusarium pseudograminearum.
  • The application of T. atroviride HB20111 not only decreased disease incidence by 60.1%, surpassing the chemical treatment, but also resulted in a 7.7% increase in wheat yield, indicating its potential as a viable alternative to chemical fungicides for
View Article and Find Full Text PDF

Burkholderia vietnamiensis B418 is a multifunctional plant growth-promoting rhizobacteria (PGPR) strain with nitrogen-fixing and phosphate-solubilizing capability which can be employed for root-knot nematode (RKN) management on various crops and vegetables. Here we investigated the control efficacy of B. vietnamiensis B418 inoculation against RKN on watermelon, applied either alone or combined with nematicides fosthiazate or avermectin, and their effects on bacterial and fungal microbiomes in rhizosphere soil.

View Article and Find Full Text PDF

A total of 120 Mesorhizobium strains collected from the central dry zone of Myanmar were analyzed in a pot experiment to evaluate nodulation and symbiotic effectiveness (SE%) in chickpea plants. Phylogenetic analyses revealed all strains belonged to the genus Mesorhizobium according to 16-23S rDNA IGS and the majority of chickpea nodulating rhizobia in Myanmar soils were most closely related to M. gobiense, M.

View Article and Find Full Text PDF

Agrocinopine C is a small molecule found in crown gall tumours induced by pathogenic Agrobacterium radiobacter carrying the tumour-inducing plasmid pTi Bo542. This phosphodiester opine was isolated (at 0.02 g/100 g fresh wt.

View Article and Find Full Text PDF

Here, we report the annotated, near-complete genome sequence of Allorhizobium vitis K377, a phytopathogenic strain isolated from a grapevine in South Australia. The assembled genome sequence is 6.40 Mb long, with 5,855 predicted protein-coding sequences, 56 tRNAs, and 12 rRNAs, and contains (tartrate metabolism; chromosomal) and nopaline synthesis, uptake, and catabolic genes (tumor-inducing plasmid-encoded).

View Article and Find Full Text PDF

is a bacterial pathogen that causes crown gall disease on a wide range of eudicot plants by genetic transformation. Besides T-DNA integrated by natural transformation of plant vegetative tissues by pathogenic spp., previous reports have indicated that T-DNA sequences originating from an ancestral sp.

View Article and Find Full Text PDF

Indole acetic acid (IAA) can upregulate genes encoding enzymes responsible for the synthesis of carboxylates involved in phosphorus (P) solubilisation. Here, we investigated whether IAA and its precursor affect the P-solubilising activity of rhizobacteria. A total of 841 rhizobacteria were obtained using taxonomically selective and enrichment isolation methods.

View Article and Find Full Text PDF

Soil nitrification (microbial oxidation of ammonium to nitrate) can lead to nitrogen leaching and environmental pollution. A number of plant species are able to suppress soil nitrifiers by exuding inhibitors from roots, a process called biological nitrification inhibition (BNI). However, the BNI activity of perennial grasses in the nutrient-poor soils of Australia and the effects of BNI activity on nitrifying microbes in the rhizosphere microbiome have not been well studied.

View Article and Find Full Text PDF

Clubroot is a disease of cruciferous crops that causes significant economic losses to vegetable production worldwide. We applied high-throughput amplicon sequencing technology to quantify the effect of LTR-2 inoculation on the rhizosphere community of Chinese cabbage ( subsp. cv.

View Article and Find Full Text PDF

Here, we present the annotated complete genome sequence of K306, a phytopathogenic strain causing crown gall of grapevine. The K306 genome is 5.79 Mb long with 5,199 predicted protein-coding genes and contains 2 circular chromosomes of 3.

View Article and Find Full Text PDF

species are widely used to control fungal and nematode diseases of crops. To date, only one complete genome has been sequenced, QM6a, a model fungus for industrial enzyme production, while the species or strains used for biological control of plant diseases are only available as draft genomes. Previously, we demonstrated that two strains ( and ) provide effective control of nematode and fungal plant pathogens.

View Article and Find Full Text PDF

Agrocin 108 is a 3'-O-β-D-xylopyranosyl-cytidine-5'-O-phosphodiester of an ascorbate-carbocyclic cyclopentenone analogue, with bacteriocin-like properties. This bacteriocin exhibits orders of magnitude greater than the inhibition zone diameter towards the indicator strain than either ampicillin or streptomycin. It has been isolated from cultures of Rhizobium rhizogenes strain K108.

View Article and Find Full Text PDF