Publications by authors named "M R Baerwald"

Freshwater fishes are increasingly facing extinction. Some species will require conservation intervention such as habitat restoration and/or population supplementation through mass-release of hatchery fish. In California, USA, a number of conservation strategies are underway to increase abundance of the endangered Delta Smelt (); however, it is unclear how different estuarine conditions influence hatchery fish.

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A refugial population of the endangered delta smelt (Hypomesus transpacificus) has been maintained at the Fish Conservation and Culture Laboratory (FCCL) at UC Davis since 2008. Despite intense genetic management, fitness differences between wild and cultured fish have been observed at the FCCL. To investigate the molecular underpinnings of hatchery domestication, we used whole-genome bisulfite sequencing to quantify epigenetic differences between wild and hatchery-origin delta smelt.

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Article Synopsis
  • Intraspecific diversity is vital for the resilience of Chinook salmon populations, particularly in California's Central Valley, which historically had a rich variety of these fish.
  • Human activities have significantly reduced this diversity, leading to negative impacts on the salmon populations' ability to withstand environmental changes.
  • Using advanced sequencing techniques, researchers found notable differences in migration timing and body size among different subpopulations, emphasizing the significance of maintaining these distinct groups for conservation efforts.
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The economic and methodological efficiencies of environmental DNA (eDNA) based survey approaches provide an unprecedented opportunity to assess and monitor aquatic environments. However, instances of inadequate communication from the scientific community about confidence levels, knowledge gaps, reliability, and appropriate parameters of eDNA-based methods have hindered their uptake in environmental monitoring programs and, in some cases, has created misperceptions or doubts in the management community. To help remedy this situation, scientists convened a session at the Second National Marine eDNA Workshop to discuss strategies for improving communications with managers.

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Detection sensitivity of aquatic species using environmental DNA (eDNA) generally decreases in turbid water but is poorly characterized. In this study, eDNA detection targeted delta smelt (), a critically endangered estuarine fish associated with turbid water. eDNA sampling in the field was first paired with a trawl survey.

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