Publications by authors named "M J Pallen"

According to the Rules of the International Code of Nomenclature of Prokaryotes (ICNP) and its appendices, names of higher taxa are formed by the addition of the appropriate suffix to the stem of the name of the type genus, and word stems derived from Latin and/or Greek are combined to compound names by means of an appropriate connecting vowel. The way the word 'stem' is used in the ICNP differs from the meaning of this term in textbooks of Latin and Greek grammar. We therefore propose to add a Note to Rule 8, clarifying that the term 'stem' when used in the ICNP corresponds with that part of the word that does not vary among the forms of the noun in the oblique cases, i.

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Here, I review the dynamic history of prokaryotic phyla. Following leads set by Darwin, Haeckel and Woese, the concept of phylum has evolved from a group sharing common phenotypes to a set of organisms sharing a common ancestry, with modern taxonomy based on phylogenetic classifications drawn from macromolecular sequences. Phyla came as surprising latecomers to the formalities of prokaryotic nomenclature in 2021.

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This article is a follow-up to Gilroy R, Ravi A, Getino M, Pursley I, Horton DL, . 2021;9:e10941, detailing accession numbers from culture collections to ensure that names for 33 new species conform to the Rules of the International Code of Nomenclature of Prokaryotes required for valid publication of names for cultured species. The following species names are now proposed to be recognized as validly published: sp.

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Article Synopsis
  • - The study investigates the genetic variation and spread of the SARS-CoV-2 Delta Variant in Palestine in August 2021, analyzing 571 positive COVID-19 samples from eight districts.
  • - Key findings revealed four dominant lineages of the Delta Variant and identified eight spatial clusters, indicating significant localized transmission across regions, particularly in Al-Khalil.
  • - Genetic diversity analysis showed high haplotype diversity but low nucleotide diversity, suggesting ongoing population dynamics and genetic differentiation between Palestinian districts, with implications for virus transmission and surveillance strategies.
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The practice of naming elements from the natural world after notable individuals stretches back to ancient times. This practice of creating eponyms-terms derived from personal names-has been carried forward into prokaryotic nomenclature, where the International Code of Nomenclature of Prokaryotes (ICNP) sets guidelines for creating scientific names from personal names. However, these guidelines can be seen as culturally biased, disjointed and, on occasion, misguided.

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