Publications by authors named "M J M Groenen"

Article Synopsis
  • This research presents a comprehensive pangenome assembly of 27 pig genomes, marking a major milestone in pig genomic data.
  • The analysis highlights how structural variations influence adaptation and breed-specific traits, identifying a crucial gene linked to intramuscular fat and meat quality.
  • These findings emphasize the importance of multi-genome studies in discovering significant genomic traits for agricultural improvement.
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Article Synopsis
  • Italian local turkey populations are crucial for maintaining genetic diversity, and efforts should focus on in vivo preservation methods.
  • Advanced genomic techniques, including whole genome sequencing and genotyping, revealed significant genetic variability and isolation among different turkey populations in Italy.
  • Findings highlight the role of selective sweeps in shaping genetic traits related to heat stress and growth, suggesting potential benefits in adapting to climate change, which can inform conservation and selection strategies for these turkeys.
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The study of protein function and dynamics in their native cellular environment is essential for progressing fundamental science. To overcome the requirement of genetic modification of the protein or the limitations of dissociable fluorescent ligands, ligand-directed (LD) chemistry has most recently emerged as a complementary, bioorthogonal approach for labeling native proteins. Here, we describe the rational design, development, and application of the first ligand-directed chemistry approach for labeling the AAR in living cells.

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Background: Integration of high throughput DNA genotyping and RNA-sequencing data enables the discovery of genomic regions that regulate gene expression, known as expression quantitative trait loci (eQTL). In pigs, efforts to date have been mainly focused on purebred lines for traits with commercial relevance as such growth and meat quality. However, little is known on genetic variants and mechanisms associated with the robustness of an animal, thus its overall health status.

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Article Synopsis
  • The text discusses a study on genomic diversity in the great tit (Parus major), focusing on how environmental factors and demographic history impact genetic variation across different populations in Europe.
  • The research, which is one of the most extensive genomic surveys for a wild vertebrate, involved analyzing about 500,000 SNP markers from 647 individuals across 29 populations to understand patterns of genomic divergence.
  • Findings revealed that genetic differentiation varied significantly among populations, influenced by factors like local recombination rates and natural selection, with reduced diversity noted in island populations and evidence of recent adaptive changes at the edges of the species' range.
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