A central feature of living matter is its ability to grow and multiply. The mechanical activity associated with growth produces both macroscopic flows shaped by confinement, and striking self-organization phenomena, such as orientational order and alignment, which are particularly prominent in populations of rod-shaped bacteria due to their nematic properties. However, how active stresses, passive mechanical interactions and flow-induced effects interact to give rise to the observed global alignment patterns remains elusive.
View Article and Find Full Text PDFAntibiotic treatments often fail to eliminate bacterial populations due to heterogeneity in how individual cells respond to the drug. In structured bacterial populations such as biofilms, bacterial metabolism and environmental transport processes lead to an emergent phenotypic structure and self-generated nutrient gradients toward the interior of the colony, which can affect cell growth, gene expression and susceptibility to the drug. Even in single cells, survival depends on a dynamic interplay between the drug's action and the expression of resistance genes.
View Article and Find Full Text PDFBackground: Many countries worldwide are faced with the choice between the (re)surgence of COVID-19 and endangering the economic and mental well-being of their citizens. While infection numbers are monitored and measures adjusted, a systematic strategy for balancing contact restrictions and socioeconomic life in the absence of a vaccine is currently lacking.
Methods: In a mathematical model, we determine the efficacy of regional containment strategies, where contact restrictions are triggered locally in individual regions upon crossing critical infection number thresholds.
Dynamical billiards are paradigmatic examples of chaotic Hamiltonian dynamical systems with widespread applications in physics. We study how well their Lyapunov exponent, characterizing the chaotic dynamics, and its dependence on external parameters can be estimated from phase space volume arguments, with emphasis on billiards with mixed regular and chaotic phase spaces. We show that in the very diverse billiards considered here, the leading contribution to the Lyapunov exponent is inversely proportional to the chaotic phase space volume and subsequently discuss the generality of this relationship.
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