Publications by authors named "Liu Yu-Yu"

Background: At present, liver transplantation (LT) is one of the best treatments for hepatocellular carcinoma (HCC). Accurately predicting the survival status after LT can significantly improve the survival rate after LT, and ensure the best way to make rational use of liver organs.

Aim: To develop a model for predicting prognosis after LT in patients with HCC.

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In the process of silicon single-crystal preparation, the timely identification and adjustment of abnormal conditions are crucial. Failure to promptly detect and resolve issues may result in a substandard silicon crystal product quality or even crystal pulling failure. Therefore, the early identification of abnormal furnace conditions is essential for ensuring the preparation of perfect silicon single crystals.

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Background: Autoimmune gastritis (AIG) is a prevalent chronic inflammatory disease with oncogenic potential that causes destruction of parietal cells and severe mucosal atrophy. We aimed to explore the distinctive gene expression profiles, activated signaling pathways, and their underlying mechanisms.

Methods: A comprehensive gene expression analysis was conducted using biopsy specimens from AIG, Helicobacter pylori-associated gastritis (HPG), and non-inflammatory normal stomachs.

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  • The Tibetan Plateau hosts unique saline lakes with unexplored actinobacteria due to harsh conditions limiting research.
  • A total of 255 actinobacterial strains were identified, with some showing antibacterial properties against pathogens, notably two strains linked to DNA damage.
  • Advanced metabolomic and genomic techniques revealed bioactive compounds, including aromatics like cosmomycin, and potential anthracycline derivatives, emphasizing the importance of integrated analysis for discovering microbial bioactive chemicals.
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Objective: The presence of intestinal metaplasia (IM) is a risk factor for gastric cancer. However, it is still controversial whether IM itself is precancerous or paracancerous. Here, we aimed to explore the precancerous nature of IM by analysing epigenetic alterations.

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Purpose: HER2-positive breast cancer has a high chance of achieving pathological complete response when HSD17B4, responsible for peroxisomal β-oxidation of very long-chain fatty acids (VLCFA) and estradiol, is methylation-silenced. Here, we aimed to identify the underlying molecular mechanism.

Methods: Using a HER2-positive breast cancer cell line, BT-474, control and knock-out (KO) clones were obtained.

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  • DNA methylation plays a key role in regulating gene expression by silencing genes through the methylation of promoter CpG islands and can either increase or decrease expression when associated with enhancers.
  • Changes in DNA methylation patterns can offer insights into a variety of factors, including tissue origin, disease risk, patient response, and prognosis in both healthy and diseased cells.
  • The text outlines various techniques for analyzing DNA methylation, such as bisulfite conversion, BeadChip microarrays, next-generation sequencing, and region-specific methods like methylation-specific PCR and bisulfite sequencing.
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  • * Researchers analyzed gastric mucosa samples from three groups: healthy individuals without H. pylori, those with atrophic gastritis, and gastric cancer patients after H. pylori treatment, measuring the overall methylation burden.
  • * Results show that methylation burden increases progressively with cancer risk, strongly correlating with the methylation levels of the single marker gene and several driver genes, indicating that this marker can effectively predict cancer risk.
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A nickel-catalyzed three-component tandem radical cyclization reaction of aryl bromides with 1,3-enynes and aryl boric acids to construct γ-lactam-substituted allene derivatives has been described. This protocol provides lactam alkyl radicals through the free radical cyclization process, which can be effectively used to participate in the subsequent multicomponent coupling reaction so that 1,3-enynes could directly convert into corresponding poly-substituted allene compounds. In addition, this efficient method enjoys a broad substrate scope and provides a series of 1,5-difunctionalized allenes in a one-pot reaction.

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Aims: Endothelial-to-mesenchymal transition (EndMT) is a fundamental process in vascular remodelling. However, the precise regulatory mechanism of vascular remodelling during neointima formation and the source of neointima cells are not entirely understood.

Methods And Results: To investigate the origin of neointima cells and their relevance to vascular wall remodelling, we used an endothelial cell (EC)-specific lineage tracing system [VE-Cadherin (Cdh5)-BAC-CreERT2 mice] and carotid artery ligation model and showed evidence that resident ECs transdifferentiate into neointima cells with the expression of CD45.

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  • Somatic mutations naturally build up in human tissues as we age and with exposure to carcinogens, and counting these mutations accurately is crucial for detecting changes in normal tissues.* -
  • A new method called EcoSeq was developed to significantly reduce the genome size for more efficient mutation analysis, allowing for the sensitive detection of mutations in a single DNA molecule with low-cost and high accuracy.* -
  • Analysis using EcoSeq showed that pediatric sarcoma patients who underwent chemotherapy had a significantly higher mutation frequency in their blood cells compared to those who did not receive treatment, suggesting a higher risk of secondary leukemia due to mutation accumulation.*
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Background: Autoimmune gastritis (AIG) is a chronic inflammatory condition in gastric mucosa and is associated with increased cancer risk, though not as high as that by Helicobacter pylori (H. pylori)-associated gastritis (HPG). Although aberrant DNA methylation is induced by HPG and the level correlates with the risk of gastric cancer, DNA methylation induction by AIG is unknown.

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  • - The study examined how arsenic disulfide (ASS) combined with itraconazole affects the growth, death, and signaling pathways of diffuse large B-cell lymphoma (DLBCL) cells.
  • - Results demonstrated that itraconazole significantly reduced the DLBCL cell viability and increased cell death rates, particularly when used with ASS, indicating a stronger effect from the combination treatment.
  • - The combination therapy was found to lower the protein levels of SMO and GLi1, which are part of the Hedgehog signaling pathway, suggesting that this pathway may play a role in the observed synergistic effects.
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  • Researchers identified two specific DNA methylation markers, SLC46A3 and cg09177106, that can effectively distinguish between gastric adenocarcinomas (GACs) and esophageal adenocarcinomas (EACs).
  • The study involved analyzing DNA methylation profiles from both types of cancer using advanced techniques, confirming the markers' predictive abilities with high sensitivity and specificity.
  • These GAC-specific markers could help improve diagnostic accuracy for esophagogastric junction adenocarcinomas, aiding therapeutic decisions.
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Nineteen compounds were isolated and structurally characterized from an ethanol extract of Dendrobium gratiossimum, including dendrogratiol A(1), DDB-1(2), 3,4-dihydroxyl-5,3',4'-trimethoxybibenzyl(3), amoenylin(4), chrysotoxine(5), DTB(6), 3,4,4'-trihydroxyl-5,3'-dimethoxybenzyl(7), 3-methylgiga(8), aloifol(9), gigantol tetramethyl ether(10), batatasin Ⅲ(11), moscatilin(12), moniliformine(13), gigantol(14), DMB(15), flavanthrinin(16), cannithrene-2(17), 3,4-dihydroxyl-5,4'-dimethoxystilbene(18) and 4-hydroxy-3,5,4'-trimethoxystilbene(19). 1 was a new compound, and 2-10, 16, 18 and 19 were obtained from this plant species for the first time. In vitro cytotoxic and antiviral activities of these isolates were evaluated, which displayed that 4 showed moderate cytotoxicity against human hepatoma cell line HepG2 with the IC_(50) of 10.

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HER2-positive breast cancers that achieve pathological complete response (pCR) after HER2-directed therapy consistently have good survival. We previously identified HSD17B4 methylation as a marker for pCR by methylation screening. Here, we aimed to identify a new marker by conducting a multi-omics analysis of materials prepared by laser capture microdissection, and adding 71 new samples.

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  • End-stage renal disease (ESRD) patients on dialysis are at higher risk for renal cell carcinomas (RCCs), particularly clear-cell RCCs (ESRD-ccRCCs) and acquired cystic disease (ACD)-associated RCCs, with their genetic differences not fully understood.
  • Genetic analyses revealed frequent VHL mutations in ESRD-ccRCCs, while ACD-associated RCCs showed chromosome 16 gains instead of losses seen in ESRD-ccRCCs.
  • Methylation and gene expression profiles indicated that ESRD-ccRCCs resembled sporadic ccRCCs, while ACD-associated RCCs aligned more with papillary RCCs, suggesting both types originated from
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  • * The system includes hardware like a triaxial accelerometer, gyroscope, microcontroller, and Bluetooth module, along with a software app to track knee joint motion using specific metrics.
  • * Experimental results show that this system is accurate, with error margins between 1.65° and 3.27° when compared to professional rehabilitation equipment, demonstrating its effectiveness for monitoring recovery.
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Various bioactive polyketides have been found in However, the polyketide synthases (PKSs), which participate in biosynthesis of polyketides in remain unknown. In this study, two type III PKSs (AbPKS1 and AbPKS2) were identified from . AbPKS1 and AbPKS2 were able to utilize malonyl-CoA to yield heptaketides (TW93a and aloesone) and octaketides (SEK4 and SEK4b), respectively.

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The p53 protein is a tumour suppressor and transcription factor that regulates the expression of target genes involved in numerous stress responses systems. In this study, we designed a screening strategy using DNA damage‑induced mouse and human transcriptome data to identify novel downstream targets of p53. Our method selected genes with an induced expression in multiple organs of X‑ray‑irradiated p53 wild‑type mice.

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Blue-light-emitting semiconductors based on polyfluorenes often exhibit an undesired green emission band. In this report, three well-defined oligofluorenes corresponding to three types of "defects" attributed to aggregation, keto formation, and chain entanglement, respectively, are systemically investigated to unveil the origins of the green emission band in fluorene-based materials. First, the optical properties of defect molecules in different states are studied.

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Glucocorticoid (GC)-induced osteoporosis (GIO) is characterized by impaired bone formation, which can be alleviated by tanshinol, an aqueous polyphenol isolated from Salvia miltiorrhiza Bunge. In this study we investigated the molecular mechanisms underlying GC-induced modulation of osteogenesis as well as the possibility of using tanshinol to interfere with GIO. Female SD rats aged 4 months were orally administered distilled water (Con), prednisone (GC, 5 mg·kg·d), GC plus tanshinol (Tan, 16 mg·kg·d) or GC plus resveratrol (Res, 5 mg·kg·d) for 14 weeks.

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Objective: To make risk stratification of aged patients with coronary artery disease by deceleration capacity of rate (DC) and heart rate deceleration runs (DRs) and to investigate the value of the two detection technologies in warning sudden cardiac death.

Methods: Two hundrend and eighteen patients diagnosed with coronary artery disease (CAD) by coronary angiography (CAG) were selected as observa-tion group:including 55 patients with latent coronary artery disease (LCHD), 56 patients with acute myocardial infarction (AMI), 53 patients with angina pectoris (AP), 54 patients with ischemic heart failure. Fifty-five healthy controls in our hospital were selected at the same time (control group).

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Acylation conducted by acyltransferase is a ubiquitous process in structure modification of secondary metabolites. It plays an important role in the structural diversity of natural products and contributes significantly to their improved stabilities, increased solubilities, and enhanced bioavailabilities. BAHD acyltransferase family is a typical kind of acyltransferase original from plants, which involved in the biosynthesis of various bioactive acylated natural products.

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The charge trapping properties of the blend of polystyrene (PS) and a sterically hindered organic semiconductor SFDBAO (spiro[fluorene-9,7-dibenzo[c,h]acridin-5-one]) are investigated by electrostatic and Kelvin probe force microscopy (EFM and KPFM). EFM signals of trapped charge spots injected with controllable tip biases, which are recorded with different dissipation times t, the percent of SFDBAO in blends, and the scanning tip bias, have been measured. By the quantitative analysis, the excellent trapped charge density of PS/SFDBAO blend films for the holes (∼×10(-5) C m(-2)) is much higher than that of the SFDBAO film (∼×10(-6) C m(-2)) and the PS film (∼×10(-7) C m(-2)).

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