Publications by authors named "Liu Yanhui"

Glioma is characterized by high heterogeneity and poor prognosis. Attempts have been made to understand its diversity in both genetic expressions and radiomic characteristics, while few integrated the two omics in predicting survival of glioma. This study was intended to investigate the connection between glioma imaging and genome, and examine its predictive value in glioma mortality risk and tumor immune microenvironment (TIME).

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Multiple artificial intelligence systems have been created to facilitate accurate and prompt histopathological diagnosis of tumors using hematoxylin-eosin-stained slides. We aimed to investigate whether weakly supervised deep learning can aid in glioma diagnosis. We analyzed 472 whole slide images (WSIs) from 226 patients in West China Hospital (WCH) and 1604 WSIs from 880 patients in The Cancer Genome Atlas (TCGA).

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The outbreak of clade II monkeypox virus (MPXV) and the additional outbreak in Central Africa of clade I virus from 2023 have attracted worldwide attention. The development of a scalable and effective vaccine against the ongoing epidemic of mpox is urgently needed. We previously constructed two bivalent MPXV mRNA vaccines, LBA (B6R-A29L) and LAM (A35R-M1R), and a quadrivalent mRNA vaccine, LBAAM (B6R-A35R-A29L-M1R).

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Lithocholic acid (LCA) is accumulated in mammals during calorie restriction and it can activate AMP-activated protein kinase (AMPK) to slow down ageing. However, the molecular details of how LCA activates AMPK and induces these biological effects are unclear. Here we show that LCA enhances the activity of sirtuins to deacetylate and subsequently inhibit vacuolar H-ATPase (v-ATPase), which leads to AMPK activation through the lysosomal glucose-sensing pathway.

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Calorie restriction (CR) is a dietary intervention used to promote health and longevity. CR causes various metabolic changes in both the production and the circulation of metabolites; however, it remains unclear which altered metabolites account for the physiological benefits of CR. Here we use metabolomics to analyse metabolites that exhibit changes in abundance during CR and perform subsequent functional validation.

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Glioblastoma (GBM) is a highly malignant tumor of the central nervous system that remains intractable despite advancements in current tumor treatment modalities, including immunotherapy. In recent years, metabolic checkpoints (aberrant metabolic pathways underlying the immunosuppressive tumor microenvironment) have gained attention as promising therapeutic targets and sensitive biomarkers across various cancers. Here, we briefly review the existing understanding of tumor metabolic checkpoints and their implications in the biology and management of GBM.

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Background: Glioma, particularly glioblastoma, is the most common and aggressive primary brain tumor, with poor prognosis due to its metabolic heterogeneity. NSUN2, an m5C RNA methyltransferase and direct glucose sensor, has been implicated in various malignancies, but its role in glioma remains unclear.

Methods: Bioinformatic analysis was performed on multiple public databases and our glioma dataset from West China Hospital (WCH).

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MYC-rearranged high-grade B-cell lymphoma (HGBCL) patients with concurrent BCL2 rearrangements (HGBCL-MYC/BCL2) often have a poor prognosis with standard chemoimmunotherapy and may benefit from more intensified regimens. Conventional fluorescence in situ hybridization (FISH) is the gold standard for detecting rearrangements, but it has several limitations. This study compared DNA- and RNA-sequencing with FISH to detect clinically relevant rearrangements in HGBCL.

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Article Synopsis
  • Glioma is a common brain tumor with traditional treatments like surgery and chemotherapy that often do not work well and have unclear outcomes.
  • Recent advancements in immunology and genomics are paving the way for new immunotherapy approaches that have shown success in other cancers.
  • This review highlights new immunotherapy methods for glioma, discusses the progress of ongoing clinical trials, and examines the challenges and future potential of glioma immunotherapy.
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In this editorial, we comment on the article ( 2024; 16: 1236-1247), which is a retrospective study of transarterial chemoembolization (TACE) combined with multi-targeted tyrosine kinase inhibitor (TKI) and programmed cell death protein-1 (PD-1) inhibitor for the treatment of unresectable hepatocellular carcinoma (HCC). Herein, we focus specifically on the mechanisms of this triple therapy, administration sequence and selection of each medication, and implications for future clinical trials. Based on the interaction mechanisms between medications, the triple therapy of TACE + TKI + PD-1 is proposed to complement the deficiency of each monotherapy, and achieve synergistic antitumor effects.

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We designed scenarios based on urban emissions to develop a Maximum Incremental Reactivity (MIR) scale for 41 conventional volatile organic compounds (VOCs) in Beijing and quantitatively analyzed the various factors affecting MIR in urban areas. We explored the effects of updating the representative urban atmosphere used for ozone reactivity calculations by incorporating updated meteorological data, emission rates, initial condition concentrations, and VOC profile compositions. A box model equipped with the Master Chemical Mechanism (MCM) was used to localize the MIR scale for Beijing based on urban emission model inputs, and this was compared with scenarios in the United States.

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Egg quality traits are economically important in the poultry industry. To explore the genetic architecture and identify potential candidate genes, a genome-wide association study (GWAS) was performed for 13 egg quality traits using data from whole-genome sequencing of 299 Longyan Shan-ma female ducks, including 12 quantitative traits and one qualitative trait, eggshell color (ESC; white, light green, green). From estimation of pedigree genetic parameters, heritability (h) ranged from 0.

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Fast development of metallic glass films with high toughness has been a long-sought goal of humankind in view of their superior properties and great potential for application in the field of soft electronics. However, until now, there has been no effective experimental strategy because of the lack of suitable and precise toughness measurement technology. In the present work, we introduced a feasible route for developing tough metallic glass films using combinatorial material library preparation and high-throughput toughness measurement nanoindentation.

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Utilizing industrial solid waste for CO mineralization not only reduces CO emissions but also promotes the resource utilization of solid waste. Additionally, it allows for the permanent sequestration of CO and enables green value-added utilization of the products. Coal fly ash (CFA) is one of the most abundant industrial solid wastes with significant carbon mineralization potential.

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Basic leucine zipper (bZIP) transcription factors play crucial roles in various biological processes and responses to environmental stresses. However, the functions of the family in tea plants remain largely unexplored. Here, we identified 74 genes in tea plants () and classified them into 12 phylogenetic groups, supported by analyses of conserved motifs and gene structures.

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Article Synopsis
  • Previous research indicates that patients with chronic obstructive pulmonary disease (COPD) are more vulnerable to severe COVID-19 infections, yet there is limited data on the severity and outcomes based on COPD phenotypes.
  • This study seeks to utilize deep learning and radiomics to assess severity and predict recovery times for COVID-19 patients affected by two types of COPD: chronic bronchitis and emphysema.
  • Findings show that COVID-19 patients with emphysema had the lowest lymphocyte counts and the highest levels of lung inflammation, suggesting a significant relationship between lymphocyte levels, lung involvement, and recovery time.
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Article Synopsis
  • - Biallelic pathogenic variants in the TARS2 gene cause combined oxidative phosphorylation deficiency subtype 21 (COXPD21), a rare form of mitochondrial encephalomyopathy, leading to severe physical and developmental issues in affected individuals.
  • - This study identified four new cases of COXPD21 from three unrelated Chinese families and described unique clinical features and genetic variations associated with the condition.
  • - The researchers found two new variants and confirmed a previously reported one that is specific to Chinese populations, which expands the understanding of genetic mutations linked to COXPD21 and enriches its clinical profile by adding new symptoms.
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Background: This study aimed to identify prognostic factors for survival and develop a prognostic nomogram to predict the survival probability of elderly patients with lower-grade gliomas (LGGs).

Methods: Elderly patients with histologically confirmed LGG were recruited from the Surveillance, Epidemiology, and End Results (SEER) database. These individuals were randomly allocated to the training and validation cohorts at a 2:1 ratio.

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Aim: There is an ongoing debate regarding the influence of psychological interventions on glycemic control in middle-aged and elderly patients diagnosed with type 2 diabetes. To establish evidence-based medical support for the therapeutic application of these interventions, this meta-analysis seeks to assess the impact of psychological interventions on glycemic control in middle-aged and elderly individuals with type 2 diabetes.

Methods: This study systematically searched six electronic databases for randomized controlled studies of psychological interventions applied to middle-aged and elderly patients with type 2 diabetes, and the search time frames were all from the time of database creation to the search period from the establishment to March 2023.

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Background: The prediction of response to immunotherapy mostly depends on the programmed death-ligand 1 (PD-L1) immunohistochemistry (IHC) status, and the 22C3 pharmDx assay has been approved in esophageal squamous cell carcinoma (ESCC). However, the widespread use of the 22C3 pharmDx assay is limited due to its availability. Thus, alternative PD-L1 assays are needed.

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Gliomas are the most common primary neuroepithelial tumors of the central nervous system in adults, of which glioblastoma is the deadliest subtype. Apart from the intrinsically indestructible characteristics of glioma (stem) cells, accumulating evidence suggests that the tumor microenvironment also plays a vital role in the refractoriness of glioblastoma. The primary functions of platelets are to stop bleeding and regulate thrombosis under physiological conditions.

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This study aimed to evaluate the effects of dabrafenib and/or trametinib therapy in BRAF v600-mutant glioma treatment. PubMed, the Cochrane Library, EMBASE and Web of Science were searched from inception to Sep 2023. Inclusion criteria were designed based on the PICO principle to select relevant articles.

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