Publications by authors named "Leomar Ballester"

Background: Merkel cell carcinoma (MCC) is a rare, aggressive cutaneous malignancy with neuroendocrine differentiation. Several molecular pathways have been implicated in MCC development and multiple cell-of-origin candidates have been proposed, including neural crest cells, which express acetylcholine receptors (AChRs). The role of nicotinic acetylcholine receptors (nAChRs) in MCC has not been explored.

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Impairment of DNA mismatch repair function in neoplasms can be assessed by DNA-based methods to assess for high microsatellite instability (MSI-High) or immunohistochemical (IHC) analysis to assess for deficiency of mismatch repair proteins (dMMR). Neoplasms with mismatch repair deficiency often have high tumor mutational burden (TMB-High). MSI-High, dMMR, and TMB-High are all histology agnostic biomarkers for potential therapy using immune checkpoint inhibitors (ICI).

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Background: Homozygous cyclin-dependent kinase inhibitor 2A/B (CDKN2A/B) loss is one of the parameters that support the designation of meningiomas as Central Nervous System (CNS) WHO grade 3 tumors. Evaluation of CDKN2A/B by sequencing or Fluorescence in situ hybridization (FISH) is costly and not always readily accessible. An immunohistochemistry (IHC)-based marker for the evaluation of CDKN2A/B loss would provide faster results at a lower cost.

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Article Synopsis
  • - Bladder cancer mortality rates are higher in African American (AA) patients compared to European American (EA) patients, but the reasons for this disparity are not fully understood.
  • - Research using RNA-Seq, proteomics, and metabolomics shows that AA bladder cancer has increased mitochondrial oxidative phosphorylation (OXPHOS) driven by complex I activation, leading to metabolic changes that promote disease progression.
  • - Targeting components of complex I and the enzyme GLS1 could be a potential therapeutic strategy, as knocking down these factors reduced tumor growth and mitochondrial activity in AA bladder cancer cells.
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Background And Objectives: Maximizing the extent of resection (EOR) improves outcomes in glioblastoma (GBM). However, previous GBM studies have not addressed the EOR impact in molecular subgroups beyond IDH1/IDH2 status. In the current article, we evaluate whether EOR confers a benefit in all GBM subtypes or only in particular molecular subgroups.

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SMARCB1 loss has long been observed in many solid tumors. However, there is a need to elucidate targetable pathways driving growth and metastasis in SMARCB1-deficient tumors. Here, we demonstrate that SMARCB1 deficiency, defined as genomic SMARCB1 copy number loss associated with reduced mRNA, drives disease progression in patients with bladder cancer by engaging STAT3.

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Introduction: Recent studies have identified that glioblastoma IDH-wildtype consists of different molecular subgroups with distinct prognoses. In order to accurately describe and classify gliomas, the Visually AcceSAble Rembrandt Images (VASARI) system was developed. The goal of this study was to evaluate the VASARI characteristics in molecular subgroups of IDH-wildtype glioblastoma.

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Article Synopsis
  • CSF analysis is currently underutilized in glioblastoma patients, partly due to a scarcity of studies showing the clinical value of CSF biomarkers.
  • This study assessed CSF from 31 glioblastoma patients and 13 non-neoplastic controls, revealing distinct metabolite differences primarily linked to fatty acid oxidation and gut microbiome impacts.
  • Additionally, specific metabolite variations were noted in GBM patients based on TP53 or PTEN mutations, suggesting that different mutations influence tumor metabolism and may provide insights into potential biomarkers.
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Article Synopsis
  • Epidermal growth factor receptor variant III (EGFRvIII) is a genetic alteration found primarily in high-grade gliomas, particularly glioblastomas.
  • A study reviewed 4,331 cases of advanced solid tumors from 2021 to 2022, discovering EGFRvIII in only 17 cases (0.4% total), mostly in brain tumors (16 cases or 7%).
  • The findings suggest that while EGFRvIII is rare, it is associated with specific features in glioblastomas and a unique case in breast sarcomatoid neoplasms, indicating potential treatment opportunities with chemotherapy or targeted therapies.
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Purpose: Genomic alterations are fundamental for molecular-guided therapy in patients with breast and lung cancer. However, the turn-around time of standard next-generation sequencing assays is a limiting factor in the timely delivery of genomic information for clinical decision-making.

Methods: In this study, we evaluated genomic alterations in 54 cerebrospinal fluid samples from 33 patients with metastatic lung cancer and metastatic breast cancer to the brain using the Oncomine Precision Assay on the Genexus sequencer.

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Article Synopsis
  • Leptomeningeal metastasis (LM) involves cancer cells spreading into the subarachnoid space, affecting fibrous structures around the brain and spinal cord.
  • The study explored how the architecture of these structures impacts tumor growth and metastasis, using electrospun polycaprolactone (PCL) to replicate the fiber architecture found in vivo.
  • Findings showed that a porous fiber structure allowed for greater spread and infiltration of pediatric medulloblastoma cells, highlighting the significance of fiber architecture in cancer behavior.
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Context.—: In the United States, review of digital whole slide images (WSIs) using specific systems is approved for primary diagnosis but has not been implemented for intraoperative consultation.

Objective.

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Isocitrate dehydrogenase (IDH) mutations are cornerstone diagnostic features in glioma classification. IDH mutations are typically characterized by mutually exclusive amino acid substitutions in the genes encoding for the and the enzyme isoforms. We report our institutional case of a diffuse astrocytoma with progression to secondary glioblastoma and concurrent IDH1/IDH2 mutations.

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Genomic alterations are critical for the diagnosis, prognostication, and treatment of patients with infiltrating gliomas. Telomerase reverse transcriptase promoter ( TERT p) mutations are among such crucial alterations. Although DNA sequencing is the preferred method for identifying TERT p mutations, it has limitations related to cost and accessibility.

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Background: Fibroblast growth factor receptors (FGFRs) are frequently altered in cancers and present a potential therapeutic avenue. However, the type and prevalence of FGFR alterations in infiltrating gliomas (IGs) needs further investigation.

Objective: To understand the prevalence/type of FGFR alterations in IGs.

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Recurrent and anaplastic pleomorphic xanthoastrocytoma (r&aPXA) is a rare primary brain tumor that is challenging to treat. Two-thirds of PXA tumors harbor a BRAF gene mutation. BRAF inhibitors have been shown to improve tumor control.

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Purpose: Systemic chemotherapy including monotherapy with temozolomide (TMZ) or bevacizumab (BEV); two-drug combinations, such as irinotecan (IRI) and BEV, TMZ and BEV and a three-drug combination with TMZ, IRI and BEV (TIB) have been used in treating patients with progressive high-grade gliomas including glioblastoma (GBM). Most patients tolerated these regimens well with known side effects of hypertension, proteinuria, and reversible clinical myelosuppression (CM). However, organ- or system- specific toxicities from chemotherapy agents have never been examined by postmortem study.

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Introduction: We aimed to evaluate IDH1 p.R132H mutation and 2-hydroxyglutarate (2HG) in cerebrospinal fluid (CSF) as biomarkers for patients with IDH-mutant gliomas.

Methods: CSF was collected from patients with infiltrating glioma, and 2HG levels were measured by liquid chromatography-mass spectrometry.

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Intrahepatic cholangiocarcinoma is a rare malignancy, which is rich in actionable alterations. Genomic aberrations in the mitogen-activated protein kinase (MAPK) pathway are common, and exon 15 p.V600E mutations are present in 5-7% of biliary tract cancers (BTC).

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The gut-brain axis has presented a valuable new dynamic in the treatment of cancer and central nervous system (CNS) diseases. However, little is known about the potential role of this axis in neuro-oncology. The goal of this review is to highlight potential implications of the gut-brain axis in neuro-oncology, in particular gliomas, and future areas of research.

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