Molecular characterization of root-lesion nematode, Pratylenchus species, and their prevalence in New Zealand maize fields.

Root-lesion nematodes (Pratylenchus spp.) are significant plant parasites, causing substantial crop damage worldwide. This study aimed to characterize Pratylenchus spp.

Missing phosphorus legacy of the Anthropocene: Quantifying residual phosphorus in the biosphere.

A defining feature of the Anthropocene is the distortion of the biosphere phosphorus (P) cycle. A relatively sudden acceleration of input fluxes without a concomitant increase in output fluxes has led to net accumulation of P in the terrestrial-aquatic continuum. Over the past century, P has been mined from geological deposits to produce crop fertilizers.

Differential structure and function of phosphorus-mineralizing microbial communities in organic and upper mineral soil horizons across a temperate rainforest chronosequence.

Microbial community structure and function were assessed in the organic and upper mineral soil across a ~4000-year dune-based chronosequence at Big Bay, New Zealand, where total P declined and the proportional contribution of organic soil in the profile increased with time. We hypothesized that the organic and mineral soils would show divergent community evolution over time with a greater dependency on the functionality of phosphatase genes in the organic soil layer as it developed. The structure of bacterial, fungal, and phosphatase-harbouring communities was examined in both horizons across 3 dunes using amplicon sequencing, network analysis, and qPCR.

Plant species identity and plant-induced changes in soil physicochemistry-but not plant phylogeny or functional traits - shape the assembly of the root-associated soil microbiome.

The root-associated soil microbiome contributes immensely to support plant health and performance against abiotic and biotic stressors. Understanding the processes that shape microbial assembly in root-associated soils is of interest in microbial ecology and plant health research. In this study, 37 plant species were grown in the same soil mixture for 10 months, whereupon the root-associated soil microbiome was assessed using amplicon sequencing.

Whole genome sequencing of Penicillium and Burkholderia strains antagonistic to the causal agent of kauri dieback disease (Phytophthora agathidicida) reveals biosynthetic gene clusters related to antimicrobial secondary metabolites.

Phytophthora agathidicida is a virulent soil pathogen of Aotearoa New Zealand's iconic kauri tree species (Agathis australis (D. Don) Lindl.) and the primary causal agent of kauri dieback disease.

Factors controlling shallow subsurface dissolved reactive phosphorus concentration and loss kinetics from poorly drained saturated grassland soils.

Shallow subsurface pathways dominate dissolved reactive phosphorus (DRP) losses in grassland soils that are: poorly drained, shallow, or have a perched water table in wetter months causing saturation-excess runoff. Saturated conditions can lead to anoxia, which can accelerate phosphorus (P) loss. Two scales of investigation were utilized in this study.

Reductive dissolution of phosphorus associated with iron-oxides during saturation in agricultural soil profiles.

In soils with a fragipan or poor permeability, water may remain in a soil profile long enough to make it anoxic and reductive. The reductive dissolution of iron (Fe)- and manganese (Mn)-oxides can release associated phosphorus (P). Therefore, the dissolved P would be vulnerable to subsurface flow and could contaminate nearby streams.

Sediment phosphorus buffering in streams at baseflow: A meta-analysis.

Phosphorus (P) pollution of surface waters remains a challenge for protecting and improving water quality. Central to the challenge is understanding what regulates P concentrations in streams. This quantitative review synthesizes the literature on a major control of P concentrations in streams at baseflow-the sediment P buffer-to better understand streamwater-sediment P interactions.

Changes in soil cadmium concentrations with time following cessation of phosphorus fertilizer inputs.

Cadmium (Cd) can accumulate in soil from the application of phosphorus fertilizer. However, there is little information on what happens to soil Cd concentrations when Cd inputs stop. This study used soil and pasture samples collected from a long-term field trial to measure changes in Cd concentrations in soil for 22 yr after Cd inputs from fertilizer had stopped and assessed whether the application of nitrogen (N) (50 kg ha  yr ) could increase plant uptake of Cd and reduce soil Cd concentrations.

Role of Organic Anions and Phosphatase Enzymes in Phosphorus Acquisition in the Rhizospheres of Legumes and Grasses Grown in a Low Phosphorus Pasture Soil.

Rhizosphere processes play a critical role in phosphorus (P) acquisition by plants and microbes, especially under P-limited conditions. Here, we investigated the impacts of nutrient addition and plant species on plant growth, rhizosphere processes, and soil P dynamics. In a glasshouse experiment, blue lupin (), white clover ( L.

Impacts of Phosphogypsum, Soluble Fertilizer and Lime Amendment of Acid Soils on the Bioavailability of Phosphorus and Sulphur Under Lucerne ().

Legumes play critical dual roles in grazed grassland ecosystems; providing nitrogen inputs and high-quality feed for grazing livestock. However, many species fail to persist in acidic, low fertility soils. A glasshouse study was conducted to investigate the response of lucerne () to phosphogypsum (PG), lime and soluble P + S fertilizer (PS) application to two soils.

Will rising atmospheric CO concentration inhibit nitrate assimilation in shoots but enhance it in roots of C plants?

Bloom et al. proposed that rising atmospheric CO concentrations 'inhibit malate production in chloroplasts and thus impede assimilation of nitrate into protein of C plants, a phenomenon that will strongly influence primary productivity and food security under the environmental conditions anticipated during the next few decades'. Previously we argued that the weight of evidence in the literature indicated that elevated atmospheric [CO ] does not inhibit NO assimilation in C plants.

Soil microbial diversity in adjacent forest systems - contrasting native, old growth kauri (Agathis australis) forest with exotic pine (Pinus radiata) plantation forest.

Globally, the conversion of primary forests to plantations and agricultural landscapes is a common land use change. Kauri (Agathis australis) is one of the most heavily impacted indigenous tree species of New Zealand with <1% of primary forest remaining as fragments adjacent to pastoral farming and exotic forest plantations. By contrasting two forest systems, we investigated if the fragmentation of kauri forests and introduction of pine plantations (Pinus radiata) are significantly impacting the diversity and composition of soil microbial communities across Waipoua kauri forest, New Zealand.

Soil Phosphorus Modeling for Modern Agriculture Requires Balance of Science and Practicality: A Perspective.

The use of phosphorus (P) fertilizers in arable crop and pastoral systems is expected to change as modern agriculture is challenged to produce more food with fewer inputs. Agricultural systems models offer a dual purpose to support and integrate recent scientific advances and to identify strategies for farmers to improve nutrient efficiency. However, compared with nitrogen and carbon, advances in P modeling have been less successful.

Impact of nitrogen compounds on fungal and bacterial contributions to codenitrification in a pasture soil.

Ruminant urine patches on grazed grassland are a significant source of agricultural nitrous oxide (NO) emissions. Of the many biotic and abiotic NO production mechanisms initiated following urine-urea deposition, codenitrification resulting in the formation of hybrid NO, is one of the least understood. Codenitrification forms hybrid NO via biotic N-nitrosation, co-metabolising organic and inorganic N compounds (N substrates) to produce NO.

Microbial and abiotic controls on mineral-associated organic matter in soil profiles along an ecosystem gradient.

Formation of mineral-organic associations is a key process in the global carbon cycle. Recent concepts propose litter quality-controlled microbial assimilation and direct sorption processes as main factors in transferring carbon from plant litter into mineral-organic associations. We explored the pathways of the formation of mineral-associated organic matter (MOM) in soil profiles along a 120-ky ecosystem gradient that developed under humid climate from the retreating Franz Josef Glacier in New Zealand.

Impact of long-term phosphorus fertilizer inputs on bacterial phoD gene community in a maize field, Northeast China.

The bacterial phoD gene encodes alkaline phosphomonoesterase, an enzyme which plays an important role in the release of plant-available inorganic phosphorus (P) from organic P in soil. However, the relationships between phoD gene community, alkaline phosphomonoesterase activity, and P availability in soil are poorly understood. In this study, we investigated how alkaline phosphomonoesterase activity, phoD gene abundance, and community structure are influenced by plant-available P using soils (0-10, 10-20 and 20-40 cm) from a long-term field trial in which a continuous maize (Zea mays L.

Elevated CO2 effects on nitrogen assimilation and growth of C3 vascular plants are similar regardless of N-form assimilated.

Atmospheric carbon dioxide concentration ([CO2]) increased from around 280 ppm in 1750 to 400 ppm in 2016 and is likely to continue to increase throughout this century. It has been argued that wheat, Arabidopsis, and C3 plants in general respond more positively to elevated atmospheric [CO2] under ammonium (NH4+) nutrition than under nitrate (NO3-) nutrition because elevated CO2 inhibits their photoreduction of NO3- and hence reduces their total plant nitrogen (N) assimilation and ultimately growth. Here, it is argued that the weight of evidence in the literature indicates that elevated atmospheric [CO2] does not inhibit NO3- assimilation and growth of C3 vascular plants.

Non-host larvae negatively impact persistence of the entomopathogen Beauveria bassiana in soil.

A better understanding of the ecology of the insect pathogenic fungus, Beauveria bassiana, in soil is needed to identify reasons behind the variable efficacy often seen after field application. A transformed strain of a candidate commercial strain of B. bassiana (F418 gfp tr3), expressing the green fluorescent protein and the hygromycin B resistance gene, was used to assess the effects of the larvae of a host insect, Tenebrio molitor L.

Phosphorus Leaching from an Organic and a Mineral Arable Soil in a Rainfall Simulation Study.

Phosphorus derived from agricultural systems has been found to cause eutrophication of surface waters. To combat this, the specific location of soil profile P release is necessary for development of effective mitigation strategies. This paper describes a P leaching study of two Swedish arable soils, an organic (Typic Haplosaprist) and a mineral soil (Typic Hapludalf), both with high P content.

Effect of land use and soil organic matter quality on the structure and function of microbial communities in pastoral soils: Implications for disease suppression.

Cropping soils vary in extent of natural suppression of soil-borne plant diseases. However, it is unknown whether similar variation occurs across pastoral agricultural systems. We examined soil microbial community properties known to be associated with disease suppression across 50 pastoral fields varying in management intensity.

Author Correction: Influence of soil moisture on codenitrification fluxes from a urea-affected pasture soil.

A correction has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper.

Influence of soil moisture on codenitrification fluxes from a urea-affected pasture soil.

Intensively managed agricultural pastures contribute to NO and N fluxes resulting in detrimental environmental outcomes and poor N use efficiency, respectively. Besides nitrification, nitrifier-denitrification and heterotrophic denitrification, alternative pathways such as codenitrification also contribute to emissions under ruminant urine-affected soil. However, information on codenitrification is sparse.