Automated landmark-based cat facial analysis and its applications.

Facial landmarks, widely studied in human affective computing, are beginning to gain interest in the animal domain. Specifically, landmark-based geometric morphometric methods have been used to objectively assess facial expressions in cats, focusing on pain recognition and the impact of breed-specific morphology on facial signaling. These methods employed a 48-landmark scheme grounded in cat facial anatomy.

Spatio-temporal model of combining chemotherapy with senolytic treatment in lung cancer.

Senescent cells are cells that stop dividing but sustain viability. Cellular senescence is the hallmark of aging, but senescence also appears in cancer, triggered by cells stress, tumor suppression of gene activation, and oncogene activity. In lung cancer, senescent cancer cells secrete VEGF, which initiates a process of angiogenesis, enabling the cancer to grow and proliferate.

Automated video-based pain recognition in cats using facial landmarks.

Affective states are reflected in the facial expressions of all mammals. Facial behaviors linked to pain have attracted most of the attention so far in non-human animals, leading to the development of numerous instruments for evaluating pain through facial expressions for various animal species. Nevertheless, manual facial expression analysis is susceptible to subjectivity and bias, is labor-intensive and often necessitates specialized expertise and training.

Computational investigation of the social function of domestic cat facial signals.

There is growing interest in the facial signals of domestic cats. Domestication may have shifted feline social dynamics towards a greater emphasis on facial signals that promote affiliative bonding. Most studies have focused on cat facial signals during human interactions or in response to pain.

Economical-epidemiological analysis of the coffee trees rust pandemic.

Coffee leaf rust is a prevalent botanical disease that causes a worldwide reduction in coffee supply and its quality, leading to immense economic losses. While several pandemic intervention policies (PIPs) for tackling this rust pandemic are commercially available, they seem to provide only partial epidemiological relief for farmers. In this work, we develop a high-resolution spatiotemporal economical-epidemiological model, extending the Susceptible-Infected-Removed model, that captures the rust pandemic's spread in coffee tree farms and its associated economic impact.

Machine learning computational model to predict lung cancer using electronic medical records.

Background: Lung cancer (LC) screening using low-dose computed tomography (CT) is recommended according to standard risk criteria or personalized risk calculators. Machine learning (ML) models that can predict disease risk are an emerging method in medicine for identifying hidden associations that are personally unique.

Materials And Methods: Using the tree-based pipeline optimization tool (TPOT), we developed an ML-based model, which is an ensemble of the Random Forest and XGboost models, based on known risk factors for LC, as part of a larger trial for ML prediction using electronic medical records and chest CT.

Exploration-exploitation model of moth-inspired olfactory navigation.

Navigation of male moths towards females during the mating search offers a unique perspective on the exploration-exploitation (EE) model in decision-making. This study uses the EE model to explain male moth pheromone-driven flight paths. Wind tunnel measurements and three-dimensional tracking using infrared cameras have been leveraged to gain insights into male moth behaviour.

Predicting lung cancer's metastats' locations using bioclinical model.

Background: Lung cancer is a global leading cause of cancer-related deaths, and metastasis profoundly influences treatment outcomes. The limitations of conventional imaging in detecting small metastases highlight the crucial need for advanced diagnostic approaches.

Methods: This study developed a bioclinical model using three-dimensional CT scans to predict the spatial spread of lung cancer metastasis.

Cost-optimal seeding strategy during a botanical pandemic in domesticated fields.

Botanical pandemics cause enormous economic damage and food shortages around the globe. However, since botanical pandemics are here to stay in the short-medium term, domesticated field owners can strategically seed their fields to optimize each session's economic profit. In this work, we propose a novel epidemiological-economic mathematical model that describes the economic profit from a field of plants during a botanical pandemic.

BovineTalk: machine learning for vocalization analysis of dairy cattle under the negative affective state of isolation.

There is a critical need to develop and validate non-invasive animal-based indicators of affective states in livestock species, in order to integrate them into on-farm assessment protocols, potentially via the use of precision livestock farming (PLF) tools. One such promising approach is the use of vocal indicators. The acoustic structure of vocalizations and their functions were extensively studied in important livestock species, such as pigs, horses, poultry, and goats, yet cattle remain understudied in this context to date.

Environmental enrichments and data-driven welfare indicators for sheltered dogs using telemetric physiological measures and signal processing.

Shelters are stressful environments for domestic dogs which are known to negatively impact their welfare. The introduction of outside stimuli for dogs in this environment can improve their welfare and life conditions. However, our current understanding of the influence of different stimuli on shelter dogs' welfare is limited and the data is still insufficient to draw conclusions.

Machine learning approaches to predict and detect early-onset of digital dermatitis in dairy cows using sensor data.

The present study aimed to employ machine learning algorithms based on sensor behavior data for (1) early-onset detection of digital dermatitis (DD) and (2) DD prediction in dairy cows. Our machine learning model, which was based on the Tree-Based Pipeline Optimization Tool (TPOT) automatic machine learning method, for DD detection on day 0 of the appearance of the clinical signs has reached an accuracy of 79% on the test set, while the model for the prediction of DD 2 days prior to the appearance of the first clinical signs, which was a combination of K-means and TPOT, has reached an accuracy of 64%. The proposed machine learning models have the potential to help achieve a real-time automated tool for monitoring and diagnosing DD in lactating dairy cows based on sensor data in conventional dairy barn environments.

BrachySound: machine learning based assessment of respiratory sounds in dogs.

The early and accurate diagnosis of brachycephalic obstructive airway syndrome (BOAS) in dogs is pivotal for effective treatment and enhanced canine well-being. Owners often do underestimate the severity of BOAS in their dogs. In addition, traditional diagnostic methods, which include pharyngolaryngeal auscultation, are often compromised by subjectivity, are time-intensive and depend on the veterinary surgeon's experience.

Cancer-inspired genomics mapper model for the generation of synthetic DNA sequences with desired genomics signatures.

Genome data are crucial in modern medicine, offering significant potential for diagnosis and treatment. Thanks to technological advancements, many millions of healthy and diseased genomes have already been sequenced; however, obtaining the most suitable data for a specific study, and specifically for validation studies, remains challenging with respect to scale and access. Therefore, in silico genomics sequence generators have been proposed as a possible solution.

Multi-species prey-predator dynamics during a multi-strain pandemic.

Small and large scale pandemics are a natural phenomenon repeatably appearing throughout history, causing ecological and biological shifts in ecosystems and a wide range of their habitats. These pandemics usually start with a single strain but shortly become multi-strain due to a mutation process of the pathogen causing the epidemic. In this study, we propose a novel eco-epidemiological model that captures multi-species prey-predator dynamics with a multi-strain pandemic.

The Causal Role of Lockdowns in COVID-19: Conclusions From Daily Epidemiological, Psychological, and Sociological Data.

Much has been written about the COVID-19 pandemic's epidemiological, psychological, and sociological consequences. Yet, the question about the role of the lockdown policy from psychological and sociological points of view has not been sufficiently addressed. Using epidemiological, psychological, and sociological daily data, we examined the causal role of lockdown and variation in morbidity referring to emotional and behavioral aspects.

Mathematical model of coffee tree's rust control using snails as biological agents.

Coffee rust is one of the main diseases that affect coffee plantations worldwide, causing large-scale ecological and economic damage. While multiple methods have been proposed to tackle this challenge, using snails as biological agents have shown to be the most consistent and promising approach. However, snails are an invasive species, and overusing them can cause devastating outcomes.

Collective evolution learning model for vision-based collective motion with collision avoidance.

Collective motion (CM) takes many forms in nature; schools of fish, flocks of birds, and swarms of locusts to name a few. Commonly, during CM the individuals of the group avoid collisions. These CM and collision avoidance (CA) behaviors are based on input from the environment such as smell, air pressure, and vision, all of which are processed by the individual and defined action.

A computational framework for physics-informed symbolic regression with straightforward integration of domain knowledge.

Discovering a meaningful symbolic expression that explains experimental data is a fundamental challenge in many scientific fields. We present a novel, open-source computational framework called Scientist-Machine Equation Detector (SciMED), which integrates scientific discipline wisdom in a scientist-in-the-loop approach, with state-of-the-art symbolic regression (SR) methods. SciMED combines a wrapper selection method, that is based on a genetic algorithm, with automatic machine learning and two levels of SR methods.

SynthEye: Investigating the Impact of Synthetic Data on Artificial Intelligence-assisted Gene Diagnosis of Inherited Retinal Disease.

Purpose: Rare disease diagnosis is challenging in medical image-based artificial intelligence due to a natural class imbalance in datasets, leading to biased prediction models. Inherited retinal diseases (IRDs) are a research domain that particularly faces this issue. This study investigates the applicability of synthetic data in improving artificial intelligence-enabled diagnosis of IRDs using generative adversarial networks (GANs).

Bounding pandemic spread by heat spread.

The beginning of a pandemic is a crucial stage for policymakers. Proper management at this stage can reduce overall health and economical damage. However, knowledge about the pandemic is insufficient.

Early Detection and Control of the Next Epidemic Wave Using Health Communications: Development of an Artificial Intelligence-Based Tool and Its Validation on COVID-19 Data from the US.

Social media networks highly influence on a broad range of global social life, especially in the context of a pandemic. We developed a mathematical model with a computational tool, called EMIT (Epidemic and Media Impact Tool), to detect and control pandemic waves, using mainly topics of relevance on social media networks and pandemic spread. Using EMIT, we analyzed health-related communications on social media networks for early prediction, detection, and control of an outbreak.