Publications by authors named "Lance Miller"

Browsers are animals that consume significant proportions of leaves, twigs, and bark from woody plants. These species have evolved morphological, physiological, and behavioral adaptations to subsist on a specialized diet. In zoos and other managed care facilities, the provision of browse in appropriate amounts helps promote positive animal welfare.

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  • High-grade serous ovarian cancer (HGSC) shows resistance to immunotherapy but some patients have partial or complete responses, indicating a potential molecular basis for immunity in specific subpopulations.
  • An algorithm called CONSTRU was developed to analyze gene expression profiles in HGSC and identify genetic factors that influence the effectiveness of anti-tumor immunity, resulting in a stratification signature (STRATsig) that divides patients into groups based on their immune response.
  • Results indicated that patient survival and immune function varied significantly among these groups, with one group (S-T1) exhibiting strong immune suppression and dysfunction, while another group (S-T3) showed improved immune function, antigen presentation, and survival benefits correlated with genetic mutations.
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Treatment of non-small cell lung cancer (NSCLC) has drastically changed in recent years owing to the robust anticancer effects of immune checkpoint inhibitors (ICI). However, only 20% of the patients with NSCLC benefit from ICIs, highlighting the need to uncover the mechanisms mediating resistance. By analyzing the overall survival (OS) and mutational profiles of 424 patients with NSCLC who received ICI treatments between 2015 and 2021, we determined that patients carrying a loss-of-function mutation in neurotrophic tyrosine kinase receptor 1 (NTRK1) had a prolonged OS when compared with patients with wild-type NTRK1.

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  • High-grade immune-related adverse events (irAEs) can limit treatment options for patients with non-small cell lung cancer (NSCLC) and predicting these events is crucial for effective therapy management.
  • A study analyzed 430 NSCLC patients who received immune checkpoint inhibitors (ICIs) to evaluate the occurrence and genetic factors associated with high-grade irAEs.
  • The findings revealed that certain genetic mutations in tumor samples were linked to a higher risk of high-grade irAEs, offering insights for treatment considerations and monitoring strategies.*
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Highly pathogenic avian influenza (HPAI) viruses have spread at an unprecedented scale, leading to mass mortalities in birds and mammals. In 2023, a transatlantic incursion of HPAI A(H5N5) viruses into North America was detected, followed shortly thereafter by a mammalian detection. As these A(H5N5) viruses were similar to contemporary viruses described in Eurasia, the transatlantic spread of A(H5N5) viruses was most likely facilitated by pelagic seabirds.

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  • Rhesus macaques naturally develop colorectal cancers (CRC) that closely resemble human CRC in terms of histology, progression, and genetic characteristics, making them valuable for studying cancer immunotherapy.
  • Detailed analyses, including advanced imaging and molecular techniques like DNA sequencing and transcriptomics, confirmed similarities in mutation patterns and functional behaviors between macaque and human CRCs, particularly highlighting MLH1 loss and microsatellite instability.
  • The research also indicated a significant presence of DNA hypermethylation, particularly affecting MLH1, contributing to alterations in DNA topology that may impact transcription factor binding, showcasing the complex molecular landscape of CRC in these primates.
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This review discusses how welfare scientists can examine vocalizations to gain insight into the affective states of individual animals. In recent years, researchers working in professionally managed settings have recognized the value of monitoring the types, rates, and acoustic structures of calls, which may reflect various aspects of welfare. Fortunately, recent technological advances in the field of bioacoustics allow for vocal activity to be recorded with microphones, hydrophones, and animal-attached devices (e.

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  • The study addresses the need for predictive biomarkers for the effectiveness of immune checkpoint inhibitors (ICIs) in treating non-small cell lung cancer (NSCLC) using data from two clinical trials.
  • A competition, the Anti-PD-1 Response Prediction DREAM Challenge, involved 59 teams submitting 417 predictive models based on various biological variables to forecast patient outcomes with ICIs.
  • The results indicate that the best models outperformed existing reference variables like tumor mutational burden (TMB) and PD-L1 expression, potentially paving the way for future research in other cancers with similar approaches.
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Natural organic matter (NOM) plays a critical role in the mobilization and bioavailability of metals and metalloids in the aquatic environment. Selenium (Se), an environmental contaminant of aquatic systems, has drawn increasing attention over the years. While Se is a vital micronutrient to human beings, animals and plants, excess Se intake may pose serious long-term risks.

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The current manuscript highlights the aspects of an animal welfare program for a modern zoological facility. The program should be proactive to identify areas for continuous improvement as well as reactive to address any identified animal welfare concerns. The program should go beyond the five freedoms and utilize one of the more modern frameworks as a foundation for the program.

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An intense public debate has fuelled governmental bans on marine mammals held in zoological institutions. The debate rests on the assumption that survival in zoological institutions has been and remains lower than in the wild, albeit the scientific evidence in support of this notion is equivocal. Here, we used statistical methods previously applied to assess historical improvements in human lifespan and data on 8864 individuals of four marine mammal species (harbour seal, ; California sea lion, ; polar bear, ; common bottlenose dolphin, ) held in zoos from 1829 to 2020.

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  • * Researchers found that the virus evolves three times faster in white-tailed deer than in humans, influenced by different mutation patterns and selection pressures.
  • * Although no significant changes in the virus's traits were detected in deer models, ongoing transmission in deer raises concerns about potential future mutations that could impact human health and livestock.
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Brain metastases is the most common intracranial tumor and account for approximately 20% of all systematic cancer cases. It is a leading cause of death in advanced-stage cancer, resulting in a five-year overall survival rate below 10%. Therefore, there is a critical need to identify effective biomarkers that can support frequent surveillance and promote efficient drug guidance in brain metastasis.

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Intermittent locomotion composed of periods of active flapping/stroking followed by inactive gliding has been observed with species that inhabit both aerial and marine environments. However, studies on the energetic benefits of a fluke-and-glide (FG) gait during horizontal locomotion are limited for dolphins. This work presents a physics-based model of FG gait and an analysis of the associated cost of transport for bottlenose dolphins (Tursiops truncatus).

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The lack of multi-omics cancer datasets with extensive follow-up information hinders the identification of accurate biomarkers of clinical outcome. In this cohort study, we performed comprehensive genomic analyses on fresh-frozen samples from 348 patients affected by primary colon cancer, encompassing RNA, whole-exome, deep T cell receptor and 16S bacterial rRNA gene sequencing on tumor and matched healthy colon tissue, complemented with tumor whole-genome sequencing for further microbiome characterization. A type 1 helper T cell, cytotoxic, gene expression signature, called Immunologic Constant of Rejection, captured the presence of clonally expanded, tumor-enriched T cell clones and outperformed conventional prognostic molecular biomarkers, such as the consensus molecular subtype and the microsatellite instability classifications.

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The brain is one of the most common metastatic sites among breast cancer patients, especially in those who have Her2-positive or triple-negative tumors. The brain microenvironment has been considered immune privileged, and the exact mechanisms of how immune cells in the brain microenvironment contribute to brain metastasis remain elusive. In this study, we found that neutrophils are recruited and influenced by c-Met high brain metastatic cells in the metastatic sites, and depletion of neutrophils significantly suppressed brain metastasis in animal models.

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Different types of therapy are currently being used to treat non-small cell lung cancer (NSCLC) depending on the stage of tumor and the presence of potentially druggable mutations. However, few biomarkers are available to guide clinicians in selecting the most effective therapy for all patients with various genetic backgrounds. To examine whether patients' mutation profiles are associated with the response to a specific treatment, we collected comprehensive clinical characteristics and sequencing data from 524 patients with stage III and IV NSCLC treated at Atrium Health Wake Forest Baptist.

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Background: Liquid biopsies have become an integral part of cancer management as minimally invasive options to detect molecular and genetic changes. However, current options show poor sensitivity in peritoneal carcinomatosis (PC). Novel exosome-based liquid biopsies may provide critical information on these challenging tumors.

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Animal welfare researchers are committed to developing novel approaches to enhance the quality of life of chimpanzees living in professional care. To systematically monitor physical, mental, and emotional states, welfare scientists highlight the importance of integrating non-invasive, animal-based welfare indicators. This study aimed to create species-specific reference intervals for behavioral measures and physiological biomarkers.

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While SARS-CoV-2 has sporadically infected a wide range of animal species worldwide1, the virus has been repeatedly and frequently detected in white-tailed deer in North America2â€"7. The zoonotic origins of this pandemic virus highlight the need to fill the vast gaps in our knowledge of SARS-CoV-2 ecology and evolution in non-human hosts. Here, we detected SARS-CoV-2 was introduced from humans into white-tailed deer more than 30 times in Ohio, USA during November 2021-March 2022.

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Background: Leptomeningeal failure (LMF) represents a devastating progression of disease following resection of brain metastases (BrM). We sought to identify a biomarker at time of BrM resection that predicts for LMF using mass spectrometry-based proteomic analysis of resected BrM and to translate this finding with histochemical assays.

Methods: We retrospectively reviewed 39 patients with proteomic data available from resected BrM.

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