Publications by authors named "LINDGREN G"

Article Synopsis
  • Horses have been shaped by human needs through selective breeding, leading to a very uniform male-specific portion of the Y chromosome (MSY) across modern breeds.
  • The study analyzed 1,517 males from 189 horse breeds, revealing the significant influence of Oriental stallions, especially Arabian and English Thoroughbred, over the past few centuries.
  • Additionally, the research uncovered two major historical waves of horse dissemination, including the "Spanish influence" from the Iberian Peninsula and the spread during the Ottoman Empire's expansion, highlighting the complex ancestry of modern horses.
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The Greying with age phenotype in horses involves loss of hair pigmentation whereas skin pigmentation is not reduced, and a predisposition to melanoma. The causal mutation was initially reported as a duplication of a 4.6 kb intronic sequence in Syntaxin 17.

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Background: The Icelandic horse and Exmoor pony are ancient, native breeds, adapted to harsh environmental conditions and they have both undergone severe historic bottlenecks. However, in modern days, the selection pressures on these breeds differ substantially. The aim of this study was to assess genetic diversity in both breeds through expected (H) and observed heterozygosity (H) and effective population size (Ne).

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  • - The study investigates how a specific genomic regulatory module affects blood pressure and protein changes in elite racehorses during exercise, focusing on two different haplotype groups: sub-elite performing (SPH) and elite performing (EPH).
  • - Researchers sampled plasma from 12 Coldblooded trotters and conducted analyses to identify differences in protein abundance related to exercise and haplotypes, discovering significant variations in plasma protein content during exercise.
  • - Findings indicate that the EPH group shows a faster switch to lipoprotein and lipid metabolism during exercise, enhancing understanding of how blood pressure regulation impacts exercise performance.
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  • * Analysis of blood pressure and plasma EDN3 levels in Coldblooded trotters and Standardbreds revealed that horses with a sub-elite haplotype had significantly higher blood pressure during exercise compared to those with an elite haplotype.
  • * The findings shed light on the genetic factors influencing athletic performance and vascular traits, suggesting that certain elite haplotypes were present in pre-domestication horses but became more common through selective breeding in modern horses.
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  • - Horses transformed human mobility, but the timeline of their domestication and integration as transport is debated, with new genetic data being used to clarify this history.
  • - Analysis of 475 ancient horse genomes indicates that modern domestic horses were shaped by human intervention around 2200 BCE, after a domestication bottleneck began around 2700 BCE, leading to a significant expansion across Eurasia.
  • - Evidence also suggests that there was early horse husbandry in central Asia at Botai around 3500 BCE, prior to the establishment of contemporary horse bloodlines, challenging the notion of large herds being linked to migrations around 3000 BCE.
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Background: In domesticated animals, many important traits are complex and regulated by a large number of genes, genetic interactions, and environmental influences. The ability of Icelandic horses to perform the gait 'pace' is largely influenced by a single mutation in the DMRT3 gene, but genetic modifiers likely exist. The aim of this study was to identify novel genetic factors that influence pacing ability and quality of the gait through a genome-wide association study (GWAS) and correlate new findings to previously identified quantitative trait loci (QTL) and mutations.

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  • This study examined the genetic diversity and selection signatures in four indigenous Iranian horse breeds: Caspian, Turkmen, Kurdish, and Persian Arabian, using genomewide genotyping data from 169 horses.
  • The research identified distinct phylogeographic clades based on the horses' geographic origins and revealed a range of significant single nucleotide polymorphisms (SNPs) associated with traits like height and adaptability.
  • Findings highlighted specific candidate genes, such as HMGA2 and LLPH, linked to height variation, and suggested new candidate genes for selection, offering insights for genetic conservation and breeding strategies.
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The Y chromosome carries information about the demography of paternal lineages, and thus, can prove invaluable for retracing both the evolutionary trajectory of wild animals and the breeding history of domesticates. In horses, the Y chromosome shows a limited, but highly informative, sequence diversity, supporting the increasing breeding influence of Oriental lineages during the last 1500 years. Here, we augment the primary horse Y-phylogeny, which is currently mainly based on modern horse breeds of economic interest, with haplotypes (HT) segregating in remote horse populations around the world.

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  • * In a study of blood samples, researchers found that as COVID-19 severity increases, the number of SARS-CoV-2-specific circulating Tfh (cTfh) cells also increases, correlating with higher antibody levels and better plasmablast differentiation.
  • * However, in patients who experience severe COVID-19, the development of effective cTfh cells is delayed, leading to slower production of high-quality antibodies, which may contribute to the progression of the disease.
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  • Horses played a crucial role in Indigenous cultures in the American Southwest and Great Plains, but the timeline and methods of their integration remain debated.
  • A study analyzing historic horse remains combined genomic, isotopic, and other evidence, revealing strong genetic ties to Iberian horses, with later British influences.
  • By the early 17th century, horses were widely adopted in Indigenous societies, impacting herd management, ceremonies, and cultural practices before European observers arrived in the 18th century.
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  • Gene expression differences can help identify genetic mechanisms linked to phenotypic traits, but dense tissues can dilute signals from rare cell types.
  • A study using polyA-selected RNA-seq was conducted on hair and skin samples from domestic horses to compare gene abundance and identify cell-type populations.
  • Results showed that non-invasive hair plucking enriched for specific keratin-related genes, while skin biopsies revealed different populations, suggesting that hair plucking could be a viable alternative to biopsies in certain research contexts.
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Osteochondrosis (OC) is an important skeletal disease causing profound welfare concerns in horses. Although numerous studies have explored the genetics underlying OC in various breeds, the Belgian Warmblood (BW) remains unstudied despite having a concerning prevalence of 32.0%.

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Since the first Spanish settlers brought horses to America centuries ago, several local varieties and breeds have been established in the New World. These were generally a consequence of the admixture of the different breeds arriving from Europe. In some instances, local horses have been selectively bred for specific traits, such as appearance, endurance, strength, and gait.

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Background: Patients with immunocompromised disorders have mainly been excluded from clinical trials of vaccination against COVID-19. Thus, the aim of this prospective clinical trial was to investigate safety and efficacy of BNT162b2 mRNA vaccination in five selected groups of immunocompromised patients and healthy controls.

Methods: 539 study subjects (449 patients and 90 controls) were included.

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Article Synopsis
  • - The study focuses on vitiligo-like depigmentation in horses, particularly in gray horses, which shows a much higher prevalence (26-67%) compared to non-gray horses (0.8-3.5%).
  • - Researchers conducted a genome-wide association study (GWAS) using SNP data from 256 horses to identify candidate genes linked to this autoimmune skin disorder, ultimately finding seven potential genes related to immune response and tumor suppression.
  • - The findings suggest a complex relationship between vitiligo and cancer, indicating that certain genes are involved in both conditions, and highlight the need for further studies to explore these connections.
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The low throughput of atomic force microscopy (AFM) is the main drawback in its large-scale deployment in industrial metrology. A promising solution would be based on the parallelization of the scanning probe system, allowing acquisition of the image by an array of probes operating simultaneously. A key step for reaching this goal relies on the miniaturization and integration of the sensing mechanism.

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A single dose of the replication-competent, live-attenuated yellow fever virus (YFV) 17D vaccine provides lifelong immunity against human YFV infection. The magnitude, kinetics, and specificity of B cell responses to YFV 17D are relatively less understood than T cell responses. In this clinical study, we focused on early immune events critical for the development of humoral immunity to YFV 17D vaccination in 24 study subjects.

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  • The study investigates the genetic factors influencing the conformation of the back and croup in Icelandic horses, which are important for their locomotion and riding performance.
  • Using a genome-wide association analysis on 177 horses, researchers identified a significant genomic region on Equus caballus chromosome 22 linked to back and croup scores.
  • Horses with a favorable genetic haplotype had better conformation and higher scores in specific gaits, indicating potential genetic influences on equine performance.
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  • Infrared thermography (IRT) is a non-invasive method used to detect thermal changes in horses, specifically by measuring maximal eye temperature (MaxET), which has been widely researched but has unclear limitations in field studies.
  • This study aimed to understand how individual factors (like breed, sex, and body size) and environmental conditions (like farm location and time of year) affect MaxET, based on 791 measurements from 32 horses over a year in Sweden.
  • Findings showed significant variability in MaxET influenced by individual characteristics and environmental factors, revealing no correlation between MaxET and rectal temperature, indicating that caution is needed when using IRT in field studies due to these variables.
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For centuries humans have been fascinated by the natural beauty of horses in motion and their different gaits. Gait classification (GC) is commonly performed through visual assessment and reliable, automated methods for real-time objective GC in horses are warranted. In this study, we used a full body network of wireless, high sampling-rate sensors combined with machine learning to fully automatically classify gait.

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Domestic animal populations are often characterised by high rates of inbreeding and low effective population sizes due to selective breeding practices. These practices can result in otherwise rare recessive deleterious alleles drifting to high frequencies, resulting in reduced fertility rates. This study aimed to identify potential recessive lethal haplotypes in the Thoroughbred horse breed, a closed population that has been selectively bred for racing performance.

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