Oxygen-Promoted on-Surface Synthesis of Polyboroxine Molecules.

We present a protocol for the on-surface synthesis of polyboroxine molecules derived from boroxine molecules precursors. This process is promoted by oxygen species present on the Au(111) surface: oxygen atoms facilitate the detachment of naphthalene units of trinaphthyl-boroxine molecules and bridge two unsaturated boroxine centers to form a boroxine-O-boroxine chemical motif. X-ray spectroscopic characterization shows that, as the synthesis process proceeds, it progressively tunes the electronic properties of the interface, thus providing a promising route to control the electron level alignment.

Effects of Oxygen Adsorption on the Optical Properties of Ag Nanoparticles.

Plasmonic metal nanoparticles are efficient light harvesters with a myriad of sensing- and energy-related applications. For such applications, the optical properties of nanoparticles of metals such as Cu, Ag, and Au can be tuned by controlling the composition, particle size, and shape, but less is known about the effects of oxidation on the plasmon resonances. In this work, we elucidate the effects of O adsorption on the optical properties of Ag particles by evaluating the thermodynamic properties of O-decorated Ag particles with calculations based on the density functional theory and subsequently computing the photoabsorption spectra with a computationally efficient time-dependent density functional theory approach.

Accurate Vertical Excitation Energies of BODIPY/Aza-BODIPY Derivatives from Excited-State Mean-Field Calculations.

We report a benchmark study of vertical excitation energies and oscillator strengths for the HOMO → LUMO transitions of 17 boron-dipyrromethene (BODIPY) structures, showing a large variety of ring sizes and substituents. Results obtained at the time-dependent density functional theory (TDDFT) and at the delta-self-consistent-field (ΔSCF) by using 13 different exchange correlation kernels (within LDA, GGA, hybrid, and range-separated approximations) are benchmarked against the experimental excitation energies when available. It is found that the time-independent ΔSCF DFT method, when used in combination with hybrid PBE0 and B3LYP functionals, largely outperforms TDDFT and can be quite competitive, in terms of accuracy, with computationally more costly wave function based methods such as CC2 and CASPT2.

Computational NEXAFS Characterization of Molecular Model Systems for 2D Boroxine Frameworks.

The electronic properties of 2D boroxine networks are computationally investigated by simulating the NEXAFS spectra of a series of molecular models, with or without morphologic defects, with respect to the ideal honeycomb structure. The models represent portions of an irregular 2D boroxine framework obtained experimentally, as supported by the Au(111) surface. The B K-edge NEXAFS spectra are calculated within the transition potential (TP) approximation (DFT-TP).

AgPd, AuPd, and AuPt Nanoalloys with Ag- or Au-Rich Compositions: Modeling Chemical Ordering and Optical Properties.

Bimetallic nanoparticles have a myriad of technological applications, but investigations of their chemical and physical properties are precluded due to their structural complexity. Here, the chemical ordering and optical properties of AgPd, AuPd, and AuPt nanoparticles have been studied computationally. One of the main aims was to clarify whether layered ordered phases similar to L1 one observed in the core of AgPt nanoparticles [Pirart J.

Carbon and Nitrogen K-Edge NEXAFS Spectra of Indole, 2,3-Dihydro-7-azaindole, and 3-Formylindole.

The near-edge X-ray absorption fine structure (NEXAFS) spectra of indole, 2,3-dihydro-7-azaindole, and 3-formylindole in the gas phase have been measured at the carbon and nitrogen K-edges. The spectral features have been interpreted based on density functional theory (DFT) calculations within the transition potential (TP) scheme, which is accurate enough for a general description of the measured C 1s NEXAFS spectra as well as for the assignment of the most relevant features. For the nitrogen K-edge, the agreement between experimental data and theoretical spectra calculated with TP-DFT was not quite satisfactory.

Correlation effects in B1s core-excited states of boronic-acid derivatives: An experimental and computational study.

We performed a theoretical investigation on the influence of electronic correlation effects on the B1s NEXAFS spectrum of boronic acid derivatives, namely, boric acid [B(OH)], phenyl boronic acid (PBA), and 1,4-phenyl diboronic acid (PDBA), employing different computational schemes of increasing complexity, ranging from the purely one-electron scheme based on the transition potential method of density functional theory (DFT-TP), time-dependent DFT (TDDFT), and multiconfigurational self-consistent field (MCSCF). We also report experimental measurements of the B1s NEXAFS spectra of the aforementioned molecules together with the high-resolution C1s NEXAFS spectrum of PBA. We demonstrate that due to the shallow B1s core energy levels compared to C, O, and N, the inclusion of static correlation effects, which can be incorporated by using multireference approaches to excited states, assumes a decisive role in reconciling experiment and theory on B1s core-electron excitation energies and oscillator strengths to valence states.

Electronic Structure Characterization of a Thiophene Benzo-Annulated Series of Common Building Blocks for Donor and Acceptor Compounds Studied by Gas Phase Photoelectron and Photoabsorption Synchrotron Spectroscopies.

The near-edge x-ray-absorption fine-structure (NEXAFS) and X-ray photoelectron spectroscopy (XPS) spectra of benzo[ b]thiophene (BBT) and dibenzothiophene (DBT) in the gas phase have been measured at the carbon K-edge and sulfur L-edge regions. The assignment of the spectral features has been provided by theoretical calculations based on density functional theory (DFT) and its time-dependent generalization (TDDFT) in the linear response regime. Observed trends in computed C 1s and S 2p ionization potentials (IPs) have been rationalized in terms of both the inductive effects due to the presence of S and the increased π-electrons delocalization arising from the benzo-annulation process.

S2p core level spectroscopy of short chain oligothiophenes.

The Near-Edge X-ray-Absorption Fine-Structure (NEXAFS) and X-ray Photoemission Spectroscopy (XPS) of short-chain oligothiophenes (thiophene, 2,2'-bithiophene, and 2,2':5',2″-terthiophene) in the gas phase have been measured in the sulfur L-edge region. The assignment of the spectral features is based on the relativistic two-component zeroth-order regular approximation time dependent density functional theory approach. The calculations allow us to estimate both the contribution of the spin-orbit splitting and of the molecular-field splitting to the sulfur binding energies and give results in good agreement with the experimental measurements.

Electronic properties of the boroxine-gold interface: evidence of ultra-fast charge delocalization.

We performed a combined experimental and theoretical study of the assembly of phenylboronic acid on the Au(111) surface, which is found to lead to the formation of triphenylboroxines by spontaneous condensation of trimers of molecules. The interface between the boroxine group and the gold surface has been characterized in terms of its electronic properties, revealing the existence of an ultra-fast charge delocalization channel in the proximity of the oxygen atoms of the heterocyclic group. More specifically, the DFT calculations show the presence of an unoccupied electronic state localized on both the oxygen atoms of the adsorbed triphenylboroxine and the gold atoms of the topmost layer.

Vibrationally resolved high-resolution NEXAFS and XPS spectra of phenanthrene and coronene.

We performed a combined experimental and theoretical study of the C1s Near-Edge X-ray Absorption Fine-Structure (NEXAFS) spectroscopy and X-ray Photoelectron Spectroscopy in the gas phase of two polycyclic aromatic hydrocarbons (phenanthrene and coronene), typically formed in combustion reactions. In the NEXAFS of both molecules, a double-peak structure appears in the C1s → LUMO region, which differ by less than 1 eV in transition energies. The vibronic coupling is found to play an important role in such systems.

Fe L-edge X-ray absorption spectra of Fe(II) polypyridyl spin crossover complexes from time-dependent density functional theory.

L-edge near-edge X-ray fine structure spectroscopy (NEXAFS) has become a powerful tool to study the electronic structure and dynamics of metallo-organic and biological compounds in solution. Here, we present a series of density functional theory calculations of Fe L-edge NEXAFS for spin crossover (SCO) complexes within the time-dependent framework. Several key factors that control the L-edge excitations have been carefully examined using an Fe(II) polypyridyl complex [Fe(tren(py)3)](2+) (where tren(py)3 = tris(2-pyridylmethyliminoethyl)amine) as a model system.

L(2,3) edge photoabsorption spectra of bulk V2O5: a two components relativistic time dependent density functional theory description with finite cluster model.

The two-component relativistic time dependent density functional theory method to treat the core electron excitations has been applied to the bulk V(2)O(5) for the description of X-ray absorption at the L edges. The theoretical method has proven accurate to reproduce the experimental NEXAFS spectrum, thanks to the inclusion of the most relevant physical effects: the crystal field, the configuration mixing, and the spin-orbit coupling. The method has been applied by taking into account suitable cluster models, accurately chosen in order to simulate at best the electronic structure of the condensed phase.

Theoretical study of near-edge X-ray absorption fine structure spectra of metal phthalocyanines at C and N K-edges.

The inner shell excitation of CuPc, NiPc, and H(2)Pc phthalocyanines at both C and N K-edges has been investigated theoretically by density functional theory calculations. The selected molecules allow one to study the effect on the spectra of the presence and the nature of the atom in the central cavity of the macrocycle. The individual characteristics of the spectra can be rationalized in terms of the position of the unequivalent C and N atomic sites, showing that sensible changes are present in the spectral features deriving from the N atoms directly bound to the atom at the center of the Pc macrocycle.

Theoretical study of sulfur L-edge XANES of thiol protected gold nanoparticles.

The Scalar Relativistic-Zero Order Regular Approximation-Time Dependent Density Functional Theory has been employed to study the sulfur L-edge XANES spectrum of the [Au(25)(SCH(3))(18)](+) model cluster, with the aim to reproduce and rationalize previous experimental data. The salient experimental features are properly described by the present calculation. The model cluster contains two different types of bidentate "staple" ligand thiol fragments, and it has been possible to assign the spectral features according to the different location of the initial core orbital on one of the two different fragments.

X-ray absorption spectroscopy of VOCl3, CrO2Cl2, and MnO3Cl: an experimental and theoretical study.

X-ray absorption spectra of gas-phase VOCl(3) and CrO(2)Cl(2) have been measured in the metal L(2,3)-edge and O K-edge regions. The assignment of the spectral features is based on the relativistic two-component ZORA TDDFT approach. The calculations provide results in excellent agreement with the experimental spectra and prove the importance of including both configuration mixing and spin-orbit coupling in the theoretical description to obtain a reliable simulation of the transition metal L(2,3)-edge.

S K-edge NEXAFS spectra of model systems for SO2 on TiO2 (110): a TDDFT simulation.

The time dependent density functional theory approach has been employed to simulate the S K edge absorption spectra of model systems for the adsorption of SO(2) on TiO(2) (110) regular surface, employing cluster models to mimic the rutile surface. The spectra calculated for the adsorbate models are compared with the spectrum of the free SO(2) in order to discuss the nature of the adsorbate-substrate interaction in terms of the differences in the core excitation spectra. The comparison with the experimental NEXAFS spectra, measured at different temperatures, is satisfactory at low temperature while it reveals the difficulty of reproducing the complex experimental situations induced by the temperature increase with an adsorption model based on a perfect TiO(2) surface.

Spin-orbit effects in the photoabsorption of WAu12 and MoAu12: a relativistic time dependent density functional study.

The electronic structure of both WAu12 and MoAu12 has been calculated at the density functional theory (DFT) level, employing the zero order regular approximation at the scalar relativistic level and including a spin-orbit coupling. The effect of the inclusion of the spin-orbit coupling is discussed, and the differences assigned to the nature of the encaged atom (W or Mo) are identified. Then, the excitation spectra of both clusters are calculated at the time-dependent DFT level, also in this case at both scalar relativistic and spin-orbit levels.

Spin-orbit relativistic calculations of the core excitation spectra of SO2.

The time dependent density functional theory approach within the two-component zero-order relativistic approximation has been applied to the calculation of the core excitation spectra of SO2 molecule. The results obtained reproduce correctly the high resolution experimental spectra and allow the assignment of the spectral features both of the valence and Rydberg regions in the S 1s and O 1s spectra. For the S 2p threshold a correct description of the spin-orbit coupling as well as of the molecular field splitting appears mandatory for a reliable description of the spectrum and a detailed attribution of the complex Rydberg manifold of core excited states.

Time dependent density functional investigation of the near-edge absorption spectra of V2O5.

We have performed Time Dependent Density Functional Theory (TDDFT) calculations employing a cluster model of the core excitation spectra of vanadium pentoxide, V(2)O(5). The excitation energies and dipole transition moments are determined for all the core edges, vanadium and oxygen K- and vanadium L-edges, treating them at the same level of accuracy. The agreement between the TDDFT theoretical spectra and the experimental data is rather good, particularly at the V and O K-edges.

Time dependent density functional theory of X-ray absorption spectroscopy of alkaline-earth oxides.

The time dependent density functional theory (TDDFT) has been employed to calculate the X-ray absorption spectra of the alkaline-earth oxides at the metal K and L and oxygen K edges. Cluster models to mimic the bulk are considered, embedded within an array of point charges to simulate the Madelung potential. Comparison with experimental data allows a precise assessment of the performances of the method, which appears competitive and suitable to reproduce the measurements.

Photoionization cross section and angular distribution calculations of carbon tetrafluoride.

Correlation in the photoionization dynamics of carbon tetrafluoride is studied in the framework of the time-dependent density-functional theory (TDDFT) approach by employing a multicentric basis set expansion of the scattering wave function linear combination of atomic orbitals (LCAO) TDDFT. Results obtained with the statistical average of orbital potentials and LB94 exchange-correlation (xc) potentials are compared with photoabsorption, photoionization, and electron-scattering experiments as well as with past theoretical calculations. Inadequacies in both the V(xc) parametrizations employed have been suggested from the analysis of the intensity plots for the D2A1 ionization.

X-ray absorption spectroscopy of titanium oxide by time dependent density functional calculations.

The potentiality of the time dependent density functional theory (TDDFT) for the description of core excitation spectra (XAS) in transition metal oxides is analyzed, considering the rutile form of TiO(2) as a test case. Cluster models are adopted to mimic the bulk, embedded within an array of point charges to simulate the Madelung potential. All of the edges, titanium and oxygen K and titanium L edges, are considered, and the TDDFT results are compared with the experimental data in order to assess the performance of the theoretical approach in dealing with this complex class of compounds.

Time dependent density functional study of the photoionization dynamics of SF6.

The B-spline linear combination of atomic orbitals method has been employed to study the valence and core photoionization dynamics of SF6. The cross section and asymmetry parameter profiles calculated at the time dependent density functional theory level have been found to be in fairly nice agreement with the experimental data, with the quality of the exchange-correlation statistical average of orbital potential results superior to the Van Leeuwen-Baerends 94 (LB94) ones [Phys. Rev.

Time-dependent density-functional theory for molecular photoionization with noniterative algorithm and multicenter B-spline basis set: CS2 and C6H6 case studies.

In this work a new direct (noniterative) algorithm to solve the time-dependent density-functional theory equations for molecular photoionization has been proposed and implemented, using a multicentric basis set expansion of B-spline functions and complete exploiting of the molecular point-group symmetry. The method has been applied to study the photoionization dynamics of CS2 and C6H6: the results confirmed the expectation of large screening effects in CS2. For C6H6 the screening effects have been found to play a minor role than in CS2, however, also in this case the quality of the final results is definitely improved.