Use of cost-effective software for lesion localization in brain surgery: Technical note.

Lesion localization has been an important aspect of neurosurgery and has advanced significantly with technological evolution. The journey started from the localization of lesion based on clinical findings to the current era where neuronavigation and virtual reality are being used for the purpose. However, the financial implications of these advanced equipments have made them inaccessible for patients in the majority of low- and middle-income countries.

Hydrogen bond directed surface dynamics at tactic poly(methyl methacrylate)/water interface.

The complexity of induced ordering for tactic poly(methyl methacrylate) (PMMA) thin films in contact with water is examined through all-atom molecular dynamics with validated potentials. We observe that for the water molecules that are hydrogen bonded to the PMMA surface, the isotactic and atactic PMMA show a 33% longer relaxation time compared to syndiotactic PMMA. Almost 94% of hydrogen bonds are with the carbonyl groups of PMMA, irrespective of temperature and tacticity.

Carbon Nanotube Based Groundwater Remediation: The Case of Trichloroethylene.

Adsorption of chlorinated organic contaminants (COCs) on carbon nanotubes (CNTs) has been gaining ground as a remedial platform for groundwater treatment. Applications depend on our mechanistic understanding of COC adsorption on CNTs. This paper lays out the nature of competing interactions at play in hybrid, membrane, and pure CNT based systems and presents results with the perspective of existing gaps in design strategies.

Local Structure Contributions to Surface Tension of a Stereoregular Polymer.

We have used all-atom molecular dynamics (MD) simulations to calculate the surface tension of melt poly(methyl methacrylate) (PMMA) as a function of tacticity. Computation of surface tension using the Kirkwood-Buff approach required hundreds of nanoseconds of equilibration. The computed slopes of surface tension versus temperature are in very good agreement with reported experimental values.

Molecular structure of poly(methyl methacrylate) surface II: Effect of stereoregularity examined through all-atom molecular dynamics.

Utilizing all-atom molecular dynamics (MD), we have analyzed the effect of tacticity and temperature on the surface structure of poly(methyl methacrylate) (PMMA) at the polymer-vacuum interface. We quantify these effects primarily through orientation, measured as the tilt with respect to the surface normal, and the surface number densities of the α-methyl, ester-methyl, carbonyl, and backbone methylene groups. Molecular structure on the surface is a complex interplay between orientation and number densities and is challenging to capture through sum frequency generation (SFG) spectroscopy alone.

Molecular structure of poly(methyl methacrylate) surface. I. Combination of interface-sensitive infrared-visible sum frequency generation, molecular dynamics simulations, and ab initio calculations.

The chemical composition and molecular structure of polymeric surfaces are important in understanding wetting, adhesion, and friction. Here, we combine interface-sensitive sum frequency generation spectroscopy (SFG), all-atom molecular dynamics (MD) simulations, and ab initio calculations to understand the composition and the orientation of chemical groups on poly(methyl methacrylate) (PMMA) surface as a function of tacticity and temperature. The SFG spectral features for isotactic and syndiotactic PMMA surfaces are similar, and the dominant peak in the spectra corresponds to the ester-methyl groups.

Epitaxial transfer through end-group coordination modulates the odd-even effect in an alkanethiol monolayer assembly.

Short spacer length and high end-group coordination lead to the top network acting as a template for the buried sulfur-gold interface of n-alkanethiols (SH-(CH2)n-OH or SH-(CH2)n-CH3) on gold {111}. Annealing and templating both drive toward a higher sampling of the spatially favorable bridge adsorption sites. The hydrogen-bonded network increases in strength by increasing the number of hydrogens participating per oxygen, from 1.

Polarization at metal-biomolecular interfaces in solution.

Metal surfaces in contact with water, surfactants and biopolymers experience attractive polarization owing to induced charges. This fundamental physical interaction complements stronger epitaxial and covalent surface interactions and remains difficult to measure experimentally. We present a first step to quantify polarization on even gold (Au) surfaces in contact with water and with aqueous solutions of peptides of different charge state (A3 and Flg-Na3) by molecular dynamics simulation in all-atomic resolution and a posteriori computation of the image potential.