Publications by authors named "Kori M"

Background/aim: Second hepatic resection is a well-established and effective treatment for recurrent hepatocellular carcinoma (HCC). Despite this, the recurrence rate of HCC remains high. The efficacy of third liver resection for re-recurrent HCC is uncertain, and prognostic factors affecting survival after third hepatectomy have not been comprehensively evaluated.

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Host-microbiome-dietary interactions play crucial roles in regulating human health, yet their direct functional assessment remains challenging. We adopted metagenome-informed metaproteomics (MIM), in mice and humans, to non-invasively explore species-level microbiome-host interactions during commensal and pathogen colonization, nutritional modification, and antibiotic-induced perturbation. Simultaneously, fecal MIM accurately characterized the nutritional exposure landscape in multiple clinical and dietary contexts.

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The posterior "tail" region of the striatum receives dense innervation from sensory brain regions and is important for behaviors that require sensorimotor integration. The output neurons of the striatum, D1 and D2 striatal projection neurons (SPNs), which make up the direct and indirect pathways, are thought to play distinct functional roles, although it remains unclear if these neurons show cell-type-specific differences in their response to sensory stimuli. Here, we examine the strength of synaptic inputs onto D1 and D2 SPNs following the stimulation of upstream auditory pathways.

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Unlabelled: Current professional guidelines enable diagnosing pediatric Celiac Disease (CeD) without a biopsy, when tissue transglutaminase (TTG) IgA antibodies are >  × 10 the upper limit of normal (ULN) and anti-endomysial antibodies (EMA) are positive in a second sample. We compared baseline characteristics and serology normalization in children diagnosed with or without biopsies. A retrospective study of pediatric patients diagnosed with CeD during 2020: group A, no biopsy and group B, biopsy-based diagnosis.

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Background: Clinical biomarkers, allow better classification of patients according to their disease risk, prognosis, and/or response to treatment. Although affordable omics-based approaches have paved the way for quicker identification of putative biomarkers, validation of biomarkers is necessary for translation of discoveries into clinical application.

Objective: Accordingly, in this study, we emphasize the potential of in silico approaches and have proposed and applied 3 novel sequential in silico pre-clinical validation steps to better identify the biomarkers that are truly desirable for clinical investment.

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Article Synopsis
  • - The study analyzed treatment decisions for H. pylori infection in children using data from the EuroPedHp Registry, focusing on various factors influencing whether or not therapy was administered, especially regarding gastrointestinal (GI) comorbidities.
  • - Out of 1165 pediatric patients, those with GI comorbidities were significantly less likely to receive eradication treatment (only 57%) compared to those with no comorbidities (89%) despite having similar symptoms and conditions.
  • - The findings suggest that H. pylori-infected children with GI issues had a much lower chance (75% reduced) of receiving treatment, indicating no rationale for different management approaches based on GI comorbidities in pediatric patients with confirmed infections.
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  • Collagenous gastritis (CG) and Lymphocytic gastritis (LG) are uncommon forms of gastritis characterized by specific cellular changes, and this study aimed to analyze their prevalence and features in children over a 23-year period.
  • In a review of 31 pediatric cases, CG was found in 11 patients (35.5%), while LG was identified in 20 patients (64.5%), most of whom presented with gastrointestinal symptoms and iron deficiency anemia.
  • Treatment typically involved iron supplements, proton pump inhibitors, and dietary changes, with most patients showing improvement in hemoglobin levels, although some required ongoing treatment and a follow-up endoscopy showed no significant histopathological changes
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Unlabelled: Iron deficiency (ID) without anemia is common in children with newly diagnosed celiac disease (CD). We aimed to assess the effect of iron supplementation versus no treatment on ferritin levels in newly diagnosed CD patients with ID adhering to a gluten-free diet (GFD). A retrospective review of children < 18 years, with low ferritin (≤ 10 ng/mL) and normal hemoglobin levels diagnosed between 12.

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Infectious disorders known as Neglected Tropical Diseases (NTDs) initially affect the world's underprivileged citizens. They have been disregarded for many years, first as a result of a general indifference to such a developing world and, more recently, as an outcome of the intense attention on AIDS, TB, and malaria. Tropical diseases mostly affect the region where health and hygiene are sacrificed, and most of the population lacks access to sufficient food and living resources.

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Background: Evolving epidemiological data and increasing antibiotic resistance mandate an update of the European and North American Societies of Pediatric Gastroenterology, Hepatology and Nutrition guidelines.

Methods: Certainty of evidence and strength of recommendations were rated by experts according to the Grading of Recommendation Assessment, Development, and Evaluation approach. PICO (patient population, intervention, comparator, and outcome) questions were developed and voted on by the group.

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Infection with SARS-CoV2, which is responsible for COVID-19, can lead to differences in disease development, severity and mortality rates depending on gender, age or the presence of certain diseases. Considering that existing studies ignore these differences, this study aims to uncover potential differences attributable to gender, age and source of sampling as well as viral load using bioinformatics and multi-omics approaches. Differential gene expression analyses were used to analyse the phenotypic differences between SARS-CoV-2 patients and controls at the mRNA level.

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  • Inflammatory Bowel Diseases (IBD) like Crohn's disease and ulcerative colitis have a higher prevalence of Familial Mediterranean Fever (FMF) compared to non-IBD individuals, with an odds ratio of 2.68.
  • The study analyzed data from a large cohort in Israel, showing that FMF is more common in patients with Crohn's disease than in those with ulcerative colitis, and often the FMF diagnosis comes before IBD.
  • FMF may lead to increased disease severity in patients with ulcerative colitis, while the disease outcomes are similar for Crohn's disease patients with or without FMF.
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Background: Helicobacter pylori may be found during upper gastrointestinal endoscopy (UGE) performed to diagnose celiac disease (CeD), inflammatory bowel disease (IBD), and eosinophilic esophagitis (EoE). We aimed to describe the frequency of H. pylori in children undergoing UGE for CeD, IBD, and EoE and the number of children receiving eradication treatment.

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The posterior "tail" region of the striatum receives dense innervation from sensory brain regions and has been demonstrated to play a role in behaviors that require sensorimotor integration including discrimination , avoidance and defense responses. The output neurons of the striatum, the D1 and D2 striatal projection neurons (SPNs) that make up the direct and indirect pathways, respectively, are thought to play differential roles in these behavioral responses, although it remains unclear if or how these neurons display differential responsivity to sensory stimuli. Here, we used whole-cell recordings in vivo and ex vivo to examine the strength of excitatory and inhibitory synaptic inputs onto D1 and D2 SPNs following the stimulation of upstream auditory pathways.

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Article Synopsis
  • * Out of 25 children who underwent UGE, 72% had a clear cause for their IDA identified, even among those without gastrointestinal symptoms, highlighting the utility of the procedure.
  • * Follow-up results showed that 92% of the children attained normalized hemoglobin levels, indicating effective treatment outcomes following the diagnostic investigation.
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Background: Mature cystic teratomas or dermoid cysts of the pancreas complicate surgical approaches because of their anatomical position and ever-growing size. Herein, we report a case of a giant mature cystic teratoma of the pancreas that was successfully resected via complete laparoscopic distal pancreatectomy (LDP).

Case Presentation: A 39-year-old female patient was referred to our hospital for the evaluation of a pancreatic tumor.

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Article Synopsis
  • - Ovarian cancer significantly contributes to cancer-related deaths in women, making early diagnosis and personalized medicine crucial to improving outcomes through new drug discovery methods.
  • - The study utilized an integrated systems biology and machine learning approach to analyze multiple transcriptome datasets, identifying a significant gene module called "SOV-module" that consists of 19 genes associated with serous ovarian cancer.
  • - The SOV-module showed impressive diagnostic accuracy of 96.7% sensitivity and 100% specificity, and 63% accuracy in prognostic predictions, underscoring its potential as a genomic biomarker for personalized treatment strategies in ovarian cancer.
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Acute myeloid leukemia (AML) is a heterogeneous disease and the most common form of acute leukemia with a poor prognosis. Due to its complexity, the disease requires the identification of biomarkers for reliable prognosis. To identify potential disease genes that regulate patient prognosis, we used differential co-expression network analysis and transcriptomics data from relapsed, refractory, and previously untreated AML patients based on their response to treatment in the present study.

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Background: Giardia lamblia may be found incidentally during upper gastrointestinal (GI) endoscopy, including when biopsies are taken for celiac disease (CeD) diagnosis. We aimed to study the clinical presentation and histopathology of G. lamblia and determine its association with CeD.

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Papillary thyroid carcinoma (PTC) is one of the most common endocrine carcinomas worldwide and the aetiology of this cancer is still not well understood. Therefore, it remains important to understand the disease mechanism and find prognostic biomarkers and/or drug candidates for PTC. Compared with approaches based on single-gene assessment, network medicine analysis offers great promise to address this need.

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Clinical resistance against bedaquiline (BDQ) remains intractable to anti-tuberculosis therapies since its introduction to the market over a decade ago. Herein, we investigated the structural and mechanical aspects of BDQ resistance in AtpE, MmpR5, and PepQ. The known target-specific resistant single non-synonymous mutations were refined to high-grade candidates.

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Article Synopsis
  • Potential Celiac Disease (PCD) is characterized by positive blood tests but no intestinal damage, and a study followed 90 kids on a gluten-containing diet to assess their health outcomes.
  • Over an average of 17.6 months, 37.8% of these children had normalized their anti-tissue transglutaminase (TTG) levels, while 13.3% were diagnosed with actual Celiac Disease after follow-up.
  • The findings suggest that while a significant number improved, regular monitoring of TTG levels is important since some children may still have high levels that could indicate risks for developing condition.
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Background: Helicobacter pylori ( H. pylori ) gastritis may be an incidental finding during upper endoscopy performed to diagnose celiac disease (CeD), inflammatory bowel disease (IBD) and eosinophilic esophagitis (EoE). We aimed to describe the incidence of H.

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Article Synopsis
  • Ulcerative proctitis (UP) is a rare form of ulcerative colitis in children, with the study analyzing clinical features and outcomes of 196 diagnosed patients aged under 18 from 2016 to 2020.
  • Most patients presented with symptoms like bloody stools and abdominal pain, and the study found that higher initial disease activity scores (PUCAI) were linked to worse outcomes, including the need for more aggressive treatments.
  • By the end of the study, nearly half of the patients showed disease progression, and only a small percentage required colectomy, highlighting the challenges in managing UP in pediatric patients.
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