Publications by authors named "Kohei Yoshiyama"

We investigated an interaction between bitterlings and a parasitic leech Hemiclepsis kasmiana in freshwater mussel hosts. We found that leeches fed on bitterling eggs and embryos; this may exert a considerable negative effect on bitterling fitness. Host choices by females of three bitterling species may be differently affected by the presence of leeches within mussels; Tanakia limbata apparently avoided laying eggs in infested mussels while T.

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Trehalose confers protection against various environmental stresses on yeast cells. In this study, trehalase gene deletion mutants that accumulate trehalose at high levels showed significant stress tolerance to acetic acid. The enhancement of trehalose accumulation can thus be considered a target in the breeding of acetic acid-tolerant yeast strains.

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We analyzed a model of phytoplankton competition for light in a well-mixed water column. The model, proposed by Gerla et al. (Oikos 120:519-527, 2011), assumed inhibition of photosynthesis at high irradiance (photoinhibition).

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What determines the vertical distribution of phytoplankton in different aquatic environments remains an open question. To address this question, we develop a model to explore how phytoplankton respond through growth and movement to opposing resource gradients and different mixing conditions. We assume stratification creates a well-mixed surface layer on top of a poorly mixed deep layer and nutrients are supplied from multiple depth-dependent sources.

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Phytoplankton compete for nutrients and light in a vertically heterogeneous environment determined by turbulent mixing. We analyzed a model of competition between two phytoplankton species in a stratified water column. We assume that the surface layer is uniformly mixed and that the deep layer is poorly mixed, as is commonly observed in lakes and oceans.

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Planktonic microorganisms are affected by various size-dependent processes both from the bottom up and from the top down. We developed a simple resource-consumer model to explore how size-dependent resource uptake and resource loss influence the growth of, and competition between, planktonic microorganisms. We considered three steps of resource uptake: diffusive transport of resource molecules, uptake by membrane transporters, and cellular enzymatic catalysis, and we investigated optimal cell size when one, two, or three of those steps limit resource uptake.

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A model of phytoplankton dynamics within a water column was analyzed with special consideration on the existence of a bifurcation set in the parameter space. We considered two resources, light and a limiting nutrient, for phytoplankton growth and assumed that the water column is separated into two layers by thermal and/or density stratification. It was shown that there exists a bifurcation set in the parameter space when the growth function meets several conditions that are general for growth functions of two essential resources.

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We showed a catastrophic transition between a surface maximum pattern and a subsurface maximum pattern of phytoplankton in a water column by a mathematical model considering the vertical distribution of phytoplankton and two resources, light and a limiting nutrient. In our model, we assumed that a water column consists of two layers: a complete mixing layer above a seasonal thermocline and an incomplete mixing layer below it. From numerical calculation of the model, we obtained that there are two stable vertical patterns of phytoplankton over a certain range of parameters of the model: a pattern having its maximum below the thermocline and another having its maximum above the thermocline.

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