Publications by authors named "Kobayashi Shintaro"

West Nile virus (WNV) is a mosquito-borne flavivirus that causes encephalitis in humans and infects crocodiles, resulting in rashes and neurological signs. In Zambia, two distinct lineages of WNV have been detected in neighbouring areas: lineage 2 in mosquitoes and lineage 1a in farmed crocodiles. Considering the risk of direct or vector-mediated WNV transmission from crocodiles to mammals, it is necessary to elucidate the pathogenicity of WNV strains derived from crocodiles.

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  • - The study focuses on making solid-state synthesis of quaternary cesium chlorides more efficient by targeting specific compositions based on predicted stabilities and available starting materials.
  • - The team uses in situ synchrotron X-ray diffraction to monitor changes during heating, assessing the synthesizability of various target compounds before attempting laboratory synthesis.
  • - Results reveal both successful and unsuccessful synthesis efforts, leading to the discovery of new polymorphs and a new compound, highlighting the importance of connecting computational predictions with experimental results.
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Structural characteristics on fluoride ion storage and conduction mechanism in LaSrMnO, and its fluoridated materials, LaSrMnOF and LaSrMnOF, for an all-solid-state fluoride ion battery positive electrode with a high volumetric capacity surpassing those of lithium-ion ones have been revealed using the Rietveld method and maximum entropy method. In LaSrMnO, once the F ions are taken into the NaCl slabs in its crystal through the charging process, it forms two stable fluoride compounds, LaSrMnOF and LaSrMnOF, with the help of the Mn oxidation reaction. In these oxyfluorides, thermal vibrations of the F ions inserted are much larger, especially in the - plane, than along the axis.

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Ilmenite-type vanadium oxides exhibit a distinctive cation-dimerization behavior. Here, we report a novel ilmenite-type compound, ZnVO. Polycrystalline ZnVO samples are synthesized under conditions of 10 GPa and 1573 K.

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  • Neutralization tests are more accurate than enzyme-linked immunosorbent assays for detecting orthoflavivirus infections, but they need live virus and biosafe labs.
  • Single-round infectious particles (SRIPs) offer a safer alternative as they can't replicate and still help detect neutralizing antibodies.
  • Producing SRIPs at a cooler temperature (28°C) rather than the standard 37°C increases their yield and retains the ability to trigger an immune response, making them useful for diagnostic tests.
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Viruses in the genus Orthohantavirus within the family Hantaviridae cause human hantavirus infections and represent a threat to public health. Hokkaido virus (HOKV), a genotype of Orthohantavirus puumalaense (Puumala virus; PUUV), was first identified in Tobetsu, Hokkaido, Japan. Although it is genetically related to the prototype of PUUV, the evolutionary pathway of HOKV is unclear.

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The demand for powder X-ray diffraction analysis continues to increase in a variety of scientific fields, as the excellent beam quality of high-brightness synchrotron light sources enables the acquisition of high-quality measurement data with high intensity and angular resolution. Synchrotron powder diffraction has enabled the rapid measurement of many samples and various in situ/operando experiments in nonambient sample environments. To meet the demands for even higher throughput measurements using high-energy X-rays at SPring-8, a high-throughput and high-resolution powder diffraction system has been developed.

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The solidification of lithium-ion batteries (LIBs) by replacing liquid electrolytes with solid electrolytes enables the development of a new class of LIBs, namely all-solid-state lithium-ion batteries (ASSLIBs), with improved safety and energy density. Such battery solidification can greatly influence the properties of battery components, as exemplified by a recent report suggesting that the (dis)charge behaviour of Fe(MoO) (FMO), a promising two-phase electrode material, differs on solid electrolytes compared to liquid electrolytes. However, its underlying mechanism remains unclear.

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Rab27a, a Rab family small GTPases, plays an important role in the trafficking and secretion of the intracellular proteins and has been reported to promote various viral multiplication. However, whether Rab27a is involved in West Nile virus (WNV) multiplication is unknown. This study examined the ability of Rab27a to suppress WNV multiplication.

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Article Synopsis
  • Bispecific antibodies (bsAbs) are a promising treatment option but present challenges in purification due to their complex structures and impurities.
  • Ceramic hydroxyapatite (CHT) is a mixed-mode medium that enhances protein purification by allowing different binding interactions, potentially yielding higher purity levels compared to traditional methods like cation exchange chromatography (CEX).
  • The study found that using CHT for bsAb purification achieved over 97% product purity, reduced high molecular weight impurities significantly, and minimized chromatography-induced aggregation, suggesting CHT's effectiveness varies based on the bsAb's characteristics.
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West Nile virus (WNV) causes encephalitis in human and animals. WNV is phylogenetically classified into at least five distinct genetic lineages with different pathogenicity. The pathogenesis of West Nile encephalitis is affected by ubiquitin accumulation in infected cells, but the mechanism is unknown.

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The most conserved fusion loop (FL) domain present in the flavivirus envelope protein has been reported as a dominant epitope for cross-reactive antibodies to mosquito-borne flaviviruses (MBFVs). As a result, establishing accurate serodiagnosis for MBFV infections has been difficult as anti-FL antibodies are induced by both natural infection and following vaccination. In this study, we modified the most conserved FL domain to overcome this cross-reactivity.

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West Nile virus (WNV) has emerged as a significant cause of viral encephalitis in humans and horses. However, the pathogenesis of the West Nile encephalitis remains unclear. Microglia are activated by WNV infection, and the pathogenic involvement of their phenotypes is controversial.

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West Nile virus (WNV) is transmitted to humans and animals by a mosquito and enters the central nervous system, leading to lethal encephalitis. Reporter viruses expressing fluorescent proteins enable detection of infected cells in vitro and in vivo, facilitating evaluation of the dynamics of viral infection, and the development of diagnostic or therapeutic methods. In this study, we developed a method for production of a recombinant replication-competent WNV expressing mCherry fluorescent protein.

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The chemical order and disorder of solids have a decisive influence on the material properties. There are numerous materials exhibiting chemical order/disorder of atoms with similar X-ray atomic scattering factors and similar neutron scattering lengths. It is difficult to investigate such order/disorder hidden in the data obtained from conventional diffraction methods.

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Viral protein assembly and virion budding are tightly regulated to enable the proper formation of progeny virions. At this late stage in the virus life cycle, some enveloped viruses take advantage of the host endosomal sorting complex required for transport (ESCRT) machinery, which contributes to the physiological functions of membrane modulation and abscission. Bullet-shaped viral particles are unique morphological characteristics of rhabdoviruses; however, the involvement of host factors in rhabdovirus infection and, specifically, the molecular mechanisms underlying virion formation are not fully understood.

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Tick-borne encephalitis virus (TBEV) is a zoonotic virus that causes tick-borne encephalitis (TBE) in humans. Infections of Sapporo-17-Io1 (Sapporo) and Oshima 5-10 (Oshima) TBEV strains showed different pathogenic effects in mice. However, the differences between the two strains are unknown.

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Topochemical reactions have led to great progress in the discovery of new metastable compounds with novel chemical and physical properties. With these reactions, the overall crystal structure of the host material is generally maintained. Here we report a topochemical synthesis of a hexagonal nitride hydride, h-Ca CrN H, by heating an orthorhombic nitride, o-Ca CrN , under hydrogen at 673 K, accompanied by a rotational structural transformation.

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Hantaviruses are potentially fatal zoonotic pathogens of the family Hantaviridae. No human infection by the Hokkaido genotype of Puumala orthohantavirus (PUUV-Hok) has been reported. However, other PUUV genotypes cause hemorrhagic fever with renal syndrome (HFRS) in humans.

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In dairy cows, low fertility caused by summer heat stress continues into the cooler autumn season. This can be caused by impaired oocyte quality in small growing follicles during summer. Here, we subjected oocyte-cumulus-granulosa complexes (OCGCs) derived from early antral follicles (0.

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Article Synopsis
  • Autophagy is a process that helps recycle cell materials and acts as a defense mechanism against viruses, but some viruses can exploit it for their own replication.
  • The study focused on the relationship between autophagy and the tick-borne encephalitis virus (TBEV) in mouse macrophages, revealing that early infection boosts viral replication, while later stages see a decline due to autophagy's activity.
  • Results showed that autophagy has a dual role; it initially helps TBEV enter cells and replicates, but later it restricts the production of the antiviral protein IFN-β, illustrating a complex interplay during infection.
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  • Tick-borne encephalitis virus (TBEV) is a zoonotic virus that leads to encephalitis in humans and has been linked to deletions in its genome's 3' untranslated region.
  • A study using reverse genetics examined the impact of a specific Y-shaped secondary structure on the virus's pathogenicity.
  • Deleting this structure resulted in higher mortality rates among infected mice but did not influence the virus's ability to reproduce in cultured cells or organs, suggesting it plays a role in TBEV's pathogenic regulation.
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  • Tick-borne encephalitis virus (TBEV) is a zoonotic virus that causes serious brain infections and is found widely in northern Eurasia, including Japan.
  • A new strain of TBEV was isolated from a tick on a dog in central Hokkaido, classified as the Far Eastern subtype, and it shares similar growth properties with another known strain.
  • The study indicates potential for unknown TBEV strains in other parts of Japan and highlights the need for additional surveys to assess the epidemiological risks of TBEV.
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  • Nucleic acid testing (NAT), especially quantitative PCR, is a key method for diagnosing flaviviruses, but often requires further sequencing for species identification.
  • This study developed a semi-comprehensive detection system combining pan-flavivirus PCR with Nanopore sequencing to identify different flavivirus species efficiently.
  • The new method showed higher sensitivity in detecting multiple flaviviruses in clinical samples and demonstrates promising results at low costs, making it a viable alternative to commercial NATs.
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