Cypridina luciferin (CypL) is a marine natural product that functions as the luminous substrate for the enzyme luciferase (CypLase). CypL has two enantiomers, ()- and ()-CypL, due to its one chiral center at the -butyl moiety. Previous studies reported that ()-CypL or racemic CypL with CypLase produced light, but the luminescence of ()-CypL with CypLase has not been investigated.
View Article and Find Full Text PDFFront Bioeng Biotechnol
February 2022
luciferase (CLuc) is a secreted luminescent protein that reacts with its substrate (Cypridina luciferin) to emit light. CLuc is known to be a thermostable protein and has been used for various research applications, including imaging and high-throughput reporter assays. Previously, we produced a large amount of recombinant CLuc for crystallographic analysis.
View Article and Find Full Text PDFWe describe the synthesis and O affinity of genetically engineered human adult haemoglobin (rHbA) wrapped covalently with recombinant human serum albumins (rHSAs) as an artificial O carrier used for a completely synthetic red blood cell (RBC) substitute. Wild-type rHbA [rHbA(wt)] expressed in yeast species Pichia pastoris shows an identical amino acid sequence and three-dimensional structure to those of native HbA. It is particularly interesting that two orientations of the prosthetic haem group in rHbA(wt) were aligned by gentle heating in the natural form.
View Article and Find Full Text PDFA core-shell ensemble of bovine hemoglobin (Hb) and human serum albumin (HSA) is an artificial O carrier as a red blood cell substitute. This protein particle is created by covalent wrapping of a carbonyl Hb with HSAs: Hb-HSA cluster, where Hb signifies the use of carbonyl Hb (relaxed (R) state conformation) as a starting material. The Hb-HSA cluster exhibits high O affinity and low cooperativity.
View Article and Find Full Text PDFThis report describes the synthesis and structure of core-shell protein clusters comprising haemoglobin (Hb) at the centre and recombinant feline serum albumin (rFSA) at the exterior, named as haemoglobin-albumin clusters (Hb-rFSA). Specifically, we highlight their capability as an artificial O carrier that can be used as a red blood cell (RBC) substitute for cats, the most populous pet animal in the world. First, rFSA was expressed by genetic engineering using Pichia yeast.
View Article and Find Full Text PDFThere is no blood bank for pet animals. Consequently, veterinarians themselves must obtain "blood" for transfusion therapy. Among the blood components, serum albumin and red blood cells (RBCs) are particularly important to save lives.
View Article and Find Full Text PDFActa Crystallogr F Struct Biol Commun
January 2015
NAD+-reducing [NiFe] hydrogenases catalyze the oxidoreduction of dihydrogen concomitant with the interconversion of NAD+ and NADH. Here, the isolation, purification and crystallization of the NAD+-reducing [NiFe] hydrogenase from Hydrogenophilus thermoluteolus TH-1 are reported. Crystals of the NAD+-reducing [NiFe] hydrogenase were obtained within one week from a solution containing polyethylene glycol using the sitting-drop vapour-diffusion method and micro-seeding.
View Article and Find Full Text PDFA highly improved method for obtaining resonance Raman (RR) spectra provided spectra comparable to the best known flavoprotein spectra when the method was tested using bovine heart NADH:ubiquinone oxidoreductase (Complex I), a protein with a molecular mass of 1000 kDa, which causes the level of RR noise to be 1 order of magnitude higher than for most flavoproteins. The FMN RR band shift (1631/1633 cm(-1)) and the increase in the magnitude of the band at 1252 cm(-1) upon binding to Complex I suggest hydrogen bond formation involving one of the C=O groups [C(2)=O] of isoalloxazine to stabilize its quinoid form. This lowers the redox potential of FMN and the electron density of the O(2) binding site [a carbon atom, C(4a)] in the reduced form.
View Article and Find Full Text PDFThe bacterial translational GTPases release factor RF3 promotes translation termination by recycling RF1 or RF2. Here, we present the crystal structures of RF3 complexed with GDP and guanosine 3',5'-(bis)diphosphate (ppGpp) at resolutions of 1.8 and 3.
View Article and Find Full Text PDFActa Crystallogr Sect F Struct Biol Cryst Commun
July 2008
Class II release factor 3 (RF3) from the sulfate-reducing bacterium Desulfovibrio vulgaris Miyazaki F, which promotes rapid dissociation of a class I release factor, has been overexpressed, purified and crystallized in complex with GDP at 293 K using the sitting-drop vapour-diffusion method. A data set was collected to 1.8 A resolution from a single crystal at 100 K using synchrotron radiation.
View Article and Find Full Text PDF