Publications by authors named "Kirby Karpan"

Diet analysis is a vital tool for understanding trophic interactions and is frequently used to inform conservation and management. Molecular approaches can identify diet items that are impossible to distinguish using more traditional visual-based methods. Yet, our understanding of how different variables, such as predator species or prey ration size, influence molecular diet analysis is still incomplete.

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Article Synopsis
  • Molecular methods like metabarcoding and quantitative PCR are promising for estimating species abundance but face challenges due to variability in DNA concentration from specimens.
  • DNA mixture analysis offers a new way to estimate specimen abundance using unique alleles but is limited by the difficulty of analyzing many variable markers in mixed samples.
  • In a study on Chinook salmon smolts, the DNA mixture analysis using microhaplotypes showed potential for accurately resolving species in high-quality DNA samples, but improvements are needed for analyzing poorer quality DNA.
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Neotropical mountain streams are important contributors of biological diversity. Two species of the characid genus Rhoadsia differing for an ecologically important morphological trait, body depth, have been described from mountain streams of the western slopes of the Andes in Ecuador. Rhoadsia altipinna is a deeper-bodied species reported from low elevations in southwestern Ecuador and northern Peru, and Rhoadsia minor is a more streamlined species that was described from high elevations (>1200 m) in the Esmeraldas drainage in northwestern Ecuador.

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