Publications by authors named "Kingsley D"

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  • The study investigates the genetic basis of axial pattern variations in wild fourspine sticklebacks in Nova Scotia, focusing on traits like dorsal spine structure and vertebra counts.
  • Using genetic crosses and quantitative trait locus (QTL) mapping, the research identifies a significant QTL on chromosome 6 that explains 15%-30% of variations in dorsal spine traits, suggesting a strong genetic influence on these morphological features.
  • It concludes that regulatory changes in developmental gene clusters are a common mechanism behind major morphological changes in different stickleback species.
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  • The threespine stickleback iridovirus (TSIV) is identified as a double-stranded DNA virus and the first of its kind found in North American wild fish, with a new occurrence reported in sticklebacks from Stormy Lake, Alaska.
  • Researchers assembled a nearly complete 115-kilobase genome of TSIV, revealing 94 open reading frames (ORFs), mostly similar to other iridoviruses, and some likely acquired through lateral gene transfer.
  • A significant prevalence of TSIV was observed in sticklebacks prior to a rotenone treatment aimed at controlling invasive fish, with a complete absence of the virus found in the population two years later, indicating a strong association between the treatment and the
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  • Snakebite envenomation is a major health issue, particularly in tropical areas like India, causing serious injury and death.
  • The review examines how ethnomedicinal herbs can complement traditional antivenoms, which are often expensive and have availability issues.
  • It also highlights the importance of understanding different snake venoms and the potential of using bioinformatics to enhance antivenom research, merging traditional remedies with modern science for better treatment options.
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Piezo1 is a mechanosensitive, nonselective Ca2+ channel which is broadly expressed in CD4+ T cells. Using lineage-specific Piezo1 knockout mice (Piezo1cKO), we show that loss of Piezo1 in CD4+ T cells significantly increased IFNγ and IL-17 production in vitro under TH1 and TH17 polarizing conditions, respectively. Despite their intrinsic proinflammatory phenotype, Piezo1cKO T cells are incapable of establishing disease in vivo in three separate adoptive transfer (AT) T cell-mediated inflammatory mouse models, including experimental autoimmune encephalomyelitis, inflammatory bowel disease (IBD), and graft versus-host disease.

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A critical question in biology is how new traits evolve, but studying this in wild animals remains challenging. Here, we probe the genetic basis of trait gain in sea robin fish, which have evolved specialized leg-like appendages for locomotion and digging along the ocean floor. We use genome sequencing, transcriptional profiling, and interspecific hybrid analysis to explore the molecular and developmental basis of leg formation.

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How do animals evolve new traits? Sea robins are fish that possess specialized leg-like appendages used to "walk" along the sea floor. Here, we show that legs are bona fide sense organs that localize buried prey. Legs are covered in sensory papillae that receive dense innervation from touch-sensitive neurons, express non-canonical epithelial taste receptors, and mediate chemical sensitivity that drives predatory digging behavior.

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  • The study investigates how recombination rates vary across the genome in marine and freshwater threespine stickleback populations from River Tyne, revealing nearly 50,000 crossover events and creating detailed recombination maps at a resolution of 3.8 kb.
  • Researchers found significant differences in recombination rates driven by both sex and ecological type, with hybrids demonstrating suppressed recombination and reduced fitness traits.
  • The findings suggest that the divergence in recombination modifiers could be key in maintaining differences between adaptively diverging populations, as hybrids show disrupted functions that affect reproduction.
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Although promoters and their enhancers are frequently contained within a topologically associating domain (TAD), some developmentally important genes have their promoter and enhancers within different TADs. Hypotheses about molecular mechanisms enabling cross-TAD interactions remain to be assessed. To test these hypotheses, we used optical reconstruction of chromatin architecture to characterize the conformations of the Pitx1 locus on single chromosomes in developing mouse limbs.

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Functional effector T cells in the tumor microenvironment (TME) are critical for successful anti-tumor responses. T cell anti-tumor function is dependent on their ability to differentiate from a naïve state, infiltrate into the tumor site, and exert cytotoxic functions. The factors dictating whether a particular T cell can successfully undergo these processes during tumor challenge are not yet completely understood.

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Bone injuries such as fractures are one major cause of morbidities worldwide. A considerable number of fractures suffer from delayed healing, and the unresolved acute pain may transition to chronic and maladaptive pain. Current management of pain involves treatment with NSAIDs and opioids with substantial adverse effects.

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  • Scientists want to understand how animals develop new traits, both by losing old ones and gaining new ones.
  • Sea robins, a type of fish, have grown new legs and special features in their brains to help them move.
  • This study uses advanced techniques to discover the genes that help sea robins form their unique legs and shows how these traits differ between species of sea robins.
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  • High pressure processing (HPP) is an effective method for inactivating viruses such as human norovirus and related caliciviruses, requiring pressures over 400 MPa for significant reduction.
  • The study evaluated the sensitivity of murine norovirus (MNV) and Tulane virus (TV) to ultra-low temperature HPP by pressurizing samples that were either thawed or frozen prior to treatment.
  • Results showed that thawed samples achieved greater log reductions of MNV and TV at various pressures compared to frozen samples, confirming that ultra-cold HPP can significantly enhance virus inactivation.
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Fins are major functional appendages of fish that have been repeatedly modified in different lineages. To search for genomic changes underlying natural fin diversity, we compared the genomes of 36 percomorph fish species that span over 100 million years of evolution and either have complete or reduced pelvic and caudal fins. We identify 1,614 genomic regions that are well-conserved in fin-complete species but missing from multiple fin-reduced lineages.

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Background: Despite its potential utility in delivering direct tumor killing and in situ whole-cell tumor vaccination, tumor cryoablation produces highly variable and unpredictable clinical response, limiting its clinical utility. The mechanism(s) driving cryoablation-induced local antitumor immunity and the associated abscopal effect is not well understood.

Methods: The aim of this study was to identify and explore a mechanism of action by which cryoablation enhances the therapeutic efficacy in metastatic tumor models.

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Allard et al. provide an overview of sea robins, a group of benthic fish that have evolved leg-like appendages that they use to walk on the sea floor and find prey.

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Sophorolipids are biosurfactants derived from the nonpathogenic yeasts such as with potential efficacy in anticancer applications. Simple and cost-effective synthesis of these drugs makes them a promising alternative to traditional chemotherapeutics, pending their success in preliminary drug-screening. Drug-screening typically utilizes 2D cell monolayers due to their simplicity and ease of high-throughput assessment.

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  • Osteosarcoma (OS) is a severe form of bone cancer that poses treatment challenges, particularly for patients with advanced disease and metastases, with high levels of TGF-β1 being linked to these issues.
  • Research indicates that blocking TGF-β1 signaling using a drug called Vactosertib can effectively reduce OS cell growth and change the tumor environment by increasing immune cells that fight cancer and lowering immune suppressors.
  • Overall, targeting TGF-β1 signaling with Vactosertib appears to be a promising therapy for osteosarcoma, addressing both the cancer cells and the surrounding immune environment for better treatment outcomes.
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Nociceptor sensory neurons play a key role in eliciting pain. An active crosstalk between nociceptor neurons and the vascular system at the molecular and cellular level is required to sense and respond to noxious stimuli. Besides nociception, interaction between nociceptor neurons and vasculature also contributes to neurogenesis and angiogenesis.

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Fins are major functional appendages of fish that have been repeatedly modified in different lineages. To search for genomic changes underlying natural fin diversity, we compared the genomes of 36 wild fish species that either have complete or reduced pelvic and caudal fins. We identify 1,614 genomic regions that are well-conserved in fin-complete species but missing from multiple fin-reduced lineages.

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Vascular Cell Adhesion Molecule-1 (VCAM-1; CD106) is a membrane protein that contributes critical physiologic functional roles in cellular immune response, including leukocyte extravasation in inflamed and infected tissues. Expressed as a cell membrane protein, VCAM-1 can also be cleaved from the cell surface into a soluble form (sVCAM-1). The integrin α4β1 (VLA-4) was identified as the first major ligand for VCAM-1.

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Hydrogel microbeads are engineered spherical microgels widely used for biomedical applications in cell cultures, tissue engineering, and drug delivery. Their mechanical and physical properties (i.e.

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Singlet oxygen is traditionally produced via photosensitizer molecules such as methylene blue, which function as catalysts. Here we investigate stimulated Raman generation of singlet oxygen from dissolved oxygen in both water (HO) and heavy water (DO) using nanosecond-pulsed visible blue laser light in the 400-440 nm spectral region without singlet oxygen photosensitizers. We report an oxygen-dependent Stokes peak in the red spectrum (600-670 nm) that is identical when produced in HO and DO.

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Understanding the mechanisms leading to new traits or additional features in organisms is a fundamental goal of evolutionary biology. We show that HOXDB regulatory changes have been used repeatedly in different fish genera to alter the length and number of the prominent dorsal spines used to classify stickleback species. In Gasterosteus aculeatus (typically 'three-spine sticklebacks'), a variant HOXDB allele is genetically linked to shortening an existing spine and adding an additional spine.

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