Publications by authors named "Kidane Y"

The study assessed the concentration of natural radionuclides in soil samples from the Bambasi district in Ethiopia's Benishangul Gumuz region using a gamma-ray spectrometer equipped with a high-purity germanium (HPGe) detector. The measured activity concentrations of U, Th, and K in soil samples varied from 46.2 ± 2.

View Article and Find Full Text PDF

The neurofibromatosis type 1 (NF1) RASopathy is associated with persistent fibrotic nonunions (pseudarthrosis) in human and mouse skeletal tissue. Here, we performed spatial transcriptomics to define the molecular signatures occurring during normal endochondral healing following fracture in mice. Within the control fracture callus, we observed spatially restricted activation of morphogenetic pathways, such as TGF-β, WNT, and BMP.

View Article and Find Full Text PDF

It may take decades to develop cardiovascular dysfunction following exposure to high doses of ionizing radiation from medical therapy or from nuclear accidents. Since astronauts may be exposed continually to a complex space radiation environment unlike that experienced on Earth, it is unresolved whether there is a risk to cardiovascular health during long-term space exploration missions. Previously, we have described that mice exposed to a single dose of simplified Galactic Cosmic Ray (GCR) develop cardiovascular dysfunction by 12 months post-radiation.

View Article and Find Full Text PDF

Matching crop varieties to their target use context and user preferences is a challenge faced by many plant breeding programs serving smallholder agriculture. Numerous participatory approaches proposed by CGIAR and other research teams over the last four decades have attempted to capture farmers' priorities/preferences and crop variety field performance in representative growing environments through experimental trials with higher external validity. Yet none have overcome the challenges of scalability, data validity and reliability, and difficulties in capturing socio-economic and environmental heterogeneity.

View Article and Find Full Text PDF

Adolescent idiopathic scoliosis (AIS) is a common and progressive spinal deformity in children that exhibits striking sexual dimorphism, with girls at more than fivefold greater risk of severe disease compared to boys. Despite its medical impact, the molecular mechanisms that drive AIS are largely unknown. We previously defined a female-specific AIS genetic risk locus in an enhancer near the gene.

View Article and Find Full Text PDF

A prominent hypothesis in ecology is that larger species ranges are found in more variable climates because species develop broader environmental tolerances, predicting a positive range size-temperature variability relationship. However, this overlooks the extreme temperatures that variable climates impose on species, with upper or lower thermal limits more likely to be exceeded. Accordingly, we propose the 'temperature range squeeze' hypothesis, predicting a negative range size-temperature variability relationship.

View Article and Find Full Text PDF
Article Synopsis
  • The study looks at different types of Staphylococcus aureus bacteria in kids with a bone infection called acute hematogenous osteomyelitis (AHO) and how they behave differently when growing.
  • Researchers compared how well three different strains of the bacteria grew in the lab, focusing on those from kids who were mildly, moderately, or severely sick.
  • The results showed that the mild strain grew better and faster, while the moderate and severe strains had different abilities that might help them cause more serious infections.
View Article and Find Full Text PDF

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) viral proteins bind to host mitochondrial proteins, likely inhibiting oxidative phosphorylation (OXPHOS) and stimulating glycolysis. We analyzed mitochondrial gene expression in nasopharyngeal and autopsy tissues from patients with coronavirus disease 2019 (COVID-19). In nasopharyngeal samples with declining viral titers, the virus blocked the transcription of a subset of nuclear DNA (nDNA)-encoded mitochondrial OXPHOS genes, induced the expression of microRNA 2392, activated HIF-1α to induce glycolysis, and activated host immune defenses including the integrated stress response.

View Article and Find Full Text PDF
Article Synopsis
  • - Adolescent idiopathic scoliosis (AIS) predominantly affects girls and is linked to genetic factors, with a specific genetic locus identified that increases the risk of severe cases compared to boys.
  • - A large genetic study of over 10,000 AIS patients revealed a significant genetic variant associated with collagen production that may contribute to spinal deformity.
  • - The study indicates that both genetic variations and estrogen signaling interfere with normal spinal development, suggesting a new model for understanding the mechanisms behind AIS.
View Article and Find Full Text PDF

In the smallholder, low-input farming systems widespread in sub-Saharan Africa, farmers select and propagate crop varieties based on their traditional knowledge and experience. A data-driven integration of their knowledge into breeding pipelines may support the sustainable intensification of local farming. Here, we combine genomics with participatory research to tap into traditional knowledge in smallholder farming systems, using durum wheat ( Desf.

View Article and Find Full Text PDF

The climate crisis is impacting agroecosystems and threatening food security of millions of smallholder farmers. Understanding the potential for current and future climatic adaptation of local crop agrobiodiversity may guide breeding efforts and support resilience of agriculture. Here, we combine a genomic and climatic characterization of a large collection of traditional barley varieties from Ethiopia, a staple for local smallholder farmers cropping in challenging environments.

View Article and Find Full Text PDF
Article Synopsis
  • * Research identified specific NF1 mutations in bone-related tissues from patients, pointing to the presence of somatic cells that may contribute to abnormal bone development, particularly pseudarthrosis (nonunion of the bone).
  • * Using advanced single-cell RNA sequencing, researchers discovered that NF1-related cell populations have impaired signaling pathways crucial for bone mineralization, suggesting these deficiencies contribute to skeletal issues in NF1 patients.
View Article and Find Full Text PDF

Mental health and social resilience play a significant role in refugees' adaptation during the resettlement process in the host country. Maintaining good mental wellbeing helps the refugees to respond to stressful experiences with healthy life choices. This study aimed to explore the mental wellbeing and social resilience of Eritrean refugees living in Germany and to identify social conditions and enablers to foster adaptation.

View Article and Find Full Text PDF

Background: Epidemiological studies to determine the pattern of eye disorders among children are important for proper health care planning and management. This study aimed to document the spectrum and frequency of eye diseases in children who attended the pediatric ophthalmology clinic of a tertiary teaching hospital in Addis Ababa, Ethiopia.

Methods: A cross-sectional and convenient sample of 1237 male and female children (16 years and below) with ocular disorders presenting for the first time and those children with a settled diagnosis coming for a follow-up visit between June 1, 2018, and May 31, 2019, were included in the study.

View Article and Find Full Text PDF
Article Synopsis
  • COVID-19 is linked to defects in mitochondrial oxidative phosphorylation (OXPHOS), with varying effects based on timing and organs involved.
  • Analysis of transcription profiles reveals that OXPHOS is initially suppressed in the nasopharyngeal area but shows increased activity in lung tissues of deceased patients.
  • The heart shows no rebound in OXPHOS function, indicating severe repression, suggesting that boosting mitochondrial gene expression could help alleviate COVID-19 severity.
View Article and Find Full Text PDF
Article Synopsis
  • Climate change is altering the distribution and functioning of species and ecosystems, particularly in vulnerable areas like the afroalpine ecosystems of tropical Africa.
  • The study predicts an upward movement and increased dominance of ericaceous vegetation, which may threaten the unique biodiversity of the endemic species in the Sanetti plateau.
  • Utilizing various modeling methods and climate scenarios, the research shows that ericaceous vegetation is likely to expand in midaltitudes while retreating from lower elevations, highlighting significant changes in this important biodiversity hotspot.
View Article and Find Full Text PDF

Oral health concerns in Eritrean refugees have been an overlooked subject. This qualitative study explored the access of Eritrean refugees and asylum-seekers (ERNRAS) to oral health care services in Heidelberg, Germany, as well as their perceptions and attitudes towards oral health care. It involved 25 participants.

View Article and Find Full Text PDF

Crop breeding must embrace the broad diversity of smallholder agricultural systems to ensure food security to the hundreds of millions of people living in challenging production environments. This need can be addressed by combining genomics, farmers' knowledge, and environmental analysis into a data-driven decentralized approach (3D-breeding). We tested this idea as a proof-of-concept by comparing a durum wheat (Triticum durum Desf.

View Article and Find Full Text PDF

With the development of transcriptomic technologies, we are able to quantify precise changes in gene expression profiles from astronauts and other organisms exposed to spaceflight. Members of NASA GeneLab and GeneLab-associated analysis working groups (AWGs) have developed a consensus pipeline for analyzing short-read RNA-sequencing data from spaceflight-associated experiments. The pipeline includes quality control, read trimming, mapping, and gene quantification steps, culminating in the detection of differentially expressed genes.

View Article and Find Full Text PDF

Spaceflight is known to impose changes on human physiology with unknown molecular etiologies. To reveal these causes, we used a multi-omics, systems biology analytical approach using biomedical profiles from fifty-nine astronauts and data from NASA's GeneLab derived from hundreds of samples flown in space to determine transcriptomic, proteomic, metabolomic, and epigenetic responses to spaceflight. Overall pathway analyses on the multi-omics datasets showed significant enrichment for mitochondrial processes, as well as innate immunity, chronic inflammation, cell cycle, circadian rhythm, and olfactory functions.

View Article and Find Full Text PDF

Background: Research studies on determination of risk factors for intestinal parasitic infections and related malnutrition and anemia in various tropical areas are necessary for appropriate preventive resource allocation and cost effective control. This study is aimed at evaluating the prevalence and risk factors of intestinal parasitosis, malnutrition, and anemia amongst elementary and junior school students in Ghindae area, Eritrea.

Method: A cross-sectional study was conducted in 6 schools around Ghindae from February to April 2018.

View Article and Find Full Text PDF

Talipes equinovarus (clubfoot, TEV) is a congenital rotational foot deformity occurring in 1 per 1000 births with increased prevalence in males compared with females. The genetic etiology of isolated clubfoot (iTEV) remains unclear. Using a genome-wide association study, we identified a locus within FSTL5, encoding follistatin-like 5, significantly associated with iTEV.

View Article and Find Full Text PDF

In response to the climate change, it is essential to provide smallholder farmers with improved field crop genotypes that may increase the resilience of their farming system. This requires a fast turnover of varieties in a system capable of injecting significant amounts of genetic diversity into productive landscapes. Crop improvement is a pivotal strategy to cope with and adapt to climate change.

View Article and Find Full Text PDF
Article Synopsis
  • Early-onset scoliosis (EOS) affects children under 10 and poses significant health risks, making it crucial to understand its molecular causes for better treatment and screening.
  • A study involved 447 Chinese patients and 13 US patients with EOS, using exome sequencing to identify genetic variants related to the condition.
  • Results showed that 20.6% of the Chinese patients had identifiable genetic issues, revealing new diseases linked to scoliosis, while specific clinical traits could predict the chances of a successful molecular diagnosis.
View Article and Find Full Text PDF

A PHP Error was encountered

Severity: Warning

Message: fopen(/var/lib/php/sessions/ci_session0k95jsjtrickbbu88n8lonahrei4ppkr): Failed to open stream: No space left on device

Filename: drivers/Session_files_driver.php

Line Number: 177

Backtrace:

File: /var/www/html/index.php
Line: 316
Function: require_once

A PHP Error was encountered

Severity: Warning

Message: session_start(): Failed to read session data: user (path: /var/lib/php/sessions)

Filename: Session/Session.php

Line Number: 137

Backtrace:

File: /var/www/html/index.php
Line: 316
Function: require_once