Publications by authors named "Khosravi B"

Image pre-processing has significant impact on performance of deep learning models in medicine; yet, there is no standardized method for DICOM pre-processing. In this study, we investigate the impact of two commonly used image preprocessing techniques, histogram equalization (HE) and values-of-interest look-up-table (VOI-LUT) transformations on the performance deep learning classifiers for chest X-rays (CXR). We generated two baseline datasets (raw pixel and standard DICOM processed) from our internal CXR dataset and then enhanced both with HE to create four distinct datasets.

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Background: The onset of the coronavirus disease 2019 (COVID-19) outbreak caused major interruptions to the entire healthcare network affecting referral, diagnosis and treatment pathways with the potential to affect cancer treatment outcomes. In Ireland a national lockdown was initiated in March 2020 involving a stay-at-home order with a limitation on travel, social interactions and closure of schools, universities and childcare facilities. We designed a retrospective study comparing treatment outcomes for patients with oropharyngeal cancer treated before and during the COVID pandemic.

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Purpose: In March 2020, a 1-week ultrahypofractionated adjuvant breast radiation therapy schedule, 26 Gy in 5 fractions, and telehealth were adopted to reduce the risk of COVID-19 for staff and patients. This study describes real-world 1-year late toxicity for ultrahypofractionation (including a sequential boost) and patient perspectives on this new schedule and telehealth workflows.

Methods And Materials: Consecutive patients were enrolled between March and August 2020.

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Deep learning techniques hold immense promise for advancing medical image analysis, particularly in tasks like image segmentation, where precise annotation of regions or volumes of interest within medical images is crucial but manually laborious and prone to interobserver and intraobserver biases. As such, deep learning approaches could provide automated solutions for such applications. However, the potential of these techniques is often undermined by challenges in reproducibility and generalizability, which are key barriers to their clinical adoption.

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Background: Enhancing efficiency is crucial in addressing the escalating scarcity of healthcare resources. It plays a pivotal role in achieving Universal Health Coverage (UHC), with the ultimate goal of ensuring health equity for all. A fundamental strategy to bolster efficiency involves pinpointing the underlying causes of inefficiency within the healthcare system through empirical research.

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Background And Purpose: Recent advances in deep learning have shown promising results in medical image analysis and segmentation. However, most brain MRI segmentation models are limited by the size of their datasets and/or the number of structures they can identify. This study evaluates the performance of six advanced deep learning models in segmenting 122 brain structures from T1-weighted MRI scans, aiming to identify the most effective model for clinical and research applications.

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Background: Discrepancies in medical data sets can perpetuate bias, especially when training deep learning models, potentially leading to biased outcomes in clinical applications. Understanding these biases is crucial for the development of equitable healthcare technologies. This study employs generative deep learning technology to explore and understand radiographic differences based on race among patients undergoing total hip arthroplasty.

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Raman spectroscopy allows for material characterization of nanoparticles; however, probing individual nanoparticles requires an efficient way of isolating and enhancing the signal. Past works have used optical trapping with nanoapertures in metal films to measure the Raman spectra of individual nanoparticles; however, those works required custom laser tweezer systems that provided a transmission signal to verify trapping events as well as costly top-down nanofabrication. Here, we trapped Titania nanoparticles in a commercial Raman system using double nanoholes (DNH) and measured their spectra while trapped.

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Article Synopsis
  • * Low-density neutrophils (LDNs) are more prevalent in severe COVID-19, negatively affecting their ability to form extracellular traps and produce reactive oxygen species, which are crucial for fighting infections.
  • * Neutrophils from severe COVID-19 patients exhibit increased presence of arginase-1 but display reduced release of this protein into the bloodstream, indicating a dysfunctional immune response that can inhibit T cell activity independently of arginase-1.
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Background: Dual-energy CT (DECT) is a non-invasive way to determine the presence of monosodium urate (MSU) crystals in the workup of gout. Color-coding distinguishes MSU from calcium following material decomposition and post-processing. Most software labels MSU as green and calcium as blue.

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Hip and knee arthroplasty are high-volume procedures undergoing rapid growth. The large volume of procedures generates a vast amount of data available for next-generation analytics. Techniques in the field of artificial intelligence (AI) can assist in large-scale pattern recognition and lead to clinical insights.

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Thyroid Ultrasound (US) is the primary method to evaluate thyroid nodules. Deep learning (DL) has been playing a significant role in evaluating thyroid cancer. We propose a DL-based pipeline to detect and classify thyroid nodules into benign or malignant groups relying on two views of US imaging.

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Purpose: The purpose of this study is to develop and apply an algorithm that automatically classifies spine radiographs of pediatric scoliosis patients.

Methods: Anterior-posterior (AP) and lateral spine radiographs were extracted from the institutional picture archive for patients with scoliosis. Overall, there were 7777 AP images and 5621 lateral images.

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Background: Chest X-rays (CXR) are essential for diagnosing a variety of conditions, but when used on new populations, model generalizability issues limit their efficacy. Generative AI, particularly denoising diffusion probabilistic models (DDPMs), offers a promising approach to generating synthetic images, enhancing dataset diversity. This study investigates the impact of synthetic data supplementation on the performance and generalizability of medical imaging research.

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Background: Data on the epidemiology of inflammatory bowel disease (IBD) in the Middle East are scarce. We aimed to describe the clinical phenotype, disease course, and medication usage of IBD cases from Iran in the Middle East.

Methods: We conducted a cross-sectional study of registered IBD patients in the Iranian Registry of Crohn's and Colitis (IRCC) from 2017 until 2022.

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In recent years, the role of Artificial Intelligence (AI) in medical imaging has become increasingly prominent, with the majority of AI applications approved by the FDA being in imaging and radiology in 2023. The surge in AI model development to tackle clinical challenges underscores the necessity for preparing high-quality medical imaging data. Proper data preparation is crucial as it fosters the creation of standardized and reproducible AI models while minimizing biases.

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Article Synopsis
  • The study focuses on enhancing the use of deep learning (DL) in medical imaging by creating a comprehensive checklist to improve reproducibility and reliability in research.
  • Researchers developed this checklist using the Delphi method, which involved rounds of surveys among 11 experts to refine items and achieve consensus on their importance.
  • The final checklist consists of 26 essential items that promote transparent reporting of DL applications in medicine, facilitating better understanding and replication of studies.
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Article Synopsis
  • - The study explored the use of a deep learning model to predict COVID-19 patient outcomes based on chest CT images, aiming to improve its clinical application through deep privacy-preserving federated learning (DPFL).
  • - A total of 3,055 patients from 19 medical centers were analyzed, with the data being divided for training, validation, and testing to evaluate model performance using metrics like accuracy and sensitivity.
  • - The results showed that the centralized model achieved an accuracy of 76% and the DPFL model had an accuracy of 75%, with both models demonstrating similar specificity and comparable area under the curve (AUC) values, suggesting no significant statistical differences between the two approaches.
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Article Synopsis
  • A retrospective study compared the clinical features and treatment of early-onset (children/adolescents) and elderly-onset inflammatory bowel disease (IBD) patients to understand differences in disease manifestation and progression.
  • The study found that early-onset IBD patients commonly had a more aggressive disease phenotype and used more intensive treatments like prednisolone and anti-TNF medications compared to elderly patients.
  • Notably, elderly-onset ulcerative colitis patients exhibited less aggressive disease and were less likely to require the same level of medication as their early-onset counterparts.
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A Food and Drug Administration (FDA)-cleared artificial intelligence (AI) algorithm misdiagnosed a finding as an intracranial hemorrhage in a patient, who was finally diagnosed with an ischemic stroke. This scenario highlights a notable failure mode of AI tools, emphasizing the importance of human-machine interaction. In this report, the authors summarize the review processes by the FDA for software as a medical device and the unique regulatory designs for radiologic AI/machine learning algorithms to ensure their safety in clinical practice.

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Background: An increased posterior tibial slope (PTS) corresponds with an increased risk of graft failure after anterior cruciate ligament (ACL) reconstruction (ACLR). Validated methods of manual PTS measurements are subject to potential interobserver variability and can be inefficient on large datasets.

Purpose/hypothesis: To develop a deep learning artificial intelligence technique for automated PTS measurement from standard lateral knee radiographs.

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