Multi-Scale Transformer Network With Edge-Aware Pre-Training for Cross-Modality MR Image Synthesis.

Cross-modality magnetic resonance (MR) image synthesis can be used to generate missing modalities from given ones. Existing (supervised learning) methods often require a large number of paired multi-modal data to train an effective synthesis model. However, it is often challenging to obtain sufficient paired data for supervised training.

Deep learning-based tumour segmentation and total metabolic tumour volume prediction in the prognosis of diffuse large B-cell lymphoma patients in 3D FDG-PET images.

Objectives: To demonstrate the effectiveness of automatic segmentation of diffuse large B-cell lymphoma (DLBCL) in 3D FDG-PET scans using a deep learning approach and validate its value in prognosis in an external validation cohort.

Methods: Two PET datasets were retrospectively analysed: 297 patients from a local centre for training and 117 patients from an external centre for validation. A 3D U-Net architecture was trained on patches randomly sampled within the PET images.

Weakly Supervised Segmentation of COVID19 Infection with Scribble Annotation on CT Images.

Segmentation of infections from CT scans is important for accurate diagnosis and follow-up in tackling the COVID-19. Although the convolutional neural network has great potential to automate the segmentation task, most existing deep learning-based infection segmentation methods require fully annotated ground-truth labels for training, which is time-consuming and labor-intensive. This paper proposed a novel weakly supervised segmentation method for COVID-19 infections in CT slices, which only requires scribble supervision and is enhanced with the uncertainty-aware self-ensembling and transformation-consistent techniques.

HF-UNet: Learning Hierarchically Inter-Task Relevance in Multi-Task U-Net for Accurate Prostate Segmentation in CT Images.

Accurate segmentation of the prostate is a key step in external beam radiation therapy treatments. In this paper, we tackle the challenging task of prostate segmentation in CT images by a two-stage network with 1) the first stage to fast localize, and 2) the second stage to accurately segment the prostate. To precisely segment the prostate in the second stage, we formulate prostate segmentation into a multi-task learning framework, which includes a main task to segment the prostate, and an auxiliary task to delineate the prostate boundary.

MetricUNet: Synergistic image- and voxel-level learning for precise prostate segmentation via online sampling.

Fully convolutional networks (FCNs), including UNet and VNet, are widely-used network architectures for semantic segmentation in recent studies. However, conventional FCN is typically trained by the cross-entropy or Dice loss, which only calculates the error between predictions and ground-truth labels for pixels individually. This often results in non-smooth neighborhoods in the predicted segmentation.

Deep Learning-Based Classification and Voxel-Based Visualization of Frontotemporal Dementia and Alzheimer's Disease.

Frontotemporal dementia (FTD) and Alzheimer's disease (AD) have overlapping symptoms, and accurate differential diagnosis is important for targeted intervention and treatment. Previous studies suggest that the deep learning (DL) techniques have the potential to solve the differential diagnosis problem of FTD, AD and normal controls (NCs), but its performance is still unclear. In addition, existing DL-assisted diagnostic studies still rely on hypothesis-based expert-level preprocessing.

Synergistic learning of lung lobe segmentation and hierarchical multi-instance classification for automated severity assessment of COVID-19 in CT images.

Understanding chest CT imaging of the coronavirus disease 2019 (COVID-19) will help detect infections early and assess the disease progression. Especially, automated severity assessment of COVID-19 in CT images plays an essential role in identifying cases that are in great need of intensive clinical care. However, it is often challenging to accurately assess the severity of this disease in CT images, due to variable infection regions in the lungs, similar imaging biomarkers, and large inter-case variations.

Classification of neurofibromatosis-related dystrophic or nondystrophic scoliosis based on image features using Bilateral CNN.

Purpose: We developed a system that can automatically classify cases of scoliosis secondary to neurofibromatosis type 1 (NF1-S) using deep learning algorithms (DLAs) and improve the accuracy and effectiveness of classification, thereby assisting surgeons with the auxiliary diagnosis.

Methods: Comprehensive experiments in NF1 classification were performed based on a dataset consisting 211 NF1-S (131 dystrophic and 80 nondystrophic NF1-S) patients. Additionally, 100 congenital scoliosis (CS), 100 adolescent idiopathic scoliosis (AIS) patients, and 114 normal controls were used for experiments in primary classification.

Characterization of the complete mitochondrial genome of the Meiren yak ().

In this study, high-throughput Illumina sequencing was employed to assemble the complete mitochondrial genome of the Meiren yak (), a local yak breed from Gansu Province, China. The mitochondrial genome is 16,321 bp long with an A + T-biased nucleotide composition and harbors 13 protein-coding, 22 Trna, and 2 rRNA genes, and a noncoding control region. The mitogenomic organization and codon usage are highly similar to those of previously published congeneric mitochondrial genomes.

Review of Artificial Intelligence Techniques in Imaging Data Acquisition, Segmentation, and Diagnosis for COVID-19.

The pandemic of coronavirus disease 2019 (COVID-19) is spreading all over the world. Medical imaging such as X-ray and computed tomography (CT) plays an essential role in the global fight against COVID-19, whereas the recently emerging artificial intelligence (AI) technologies further strengthen the power of the imaging tools and help medical specialists. We hereby review the rapid responses in the community of medical imaging (empowered by AI) toward COVID-19.

Cascaded MultiTask 3-D Fully Convolutional Networks for Pancreas Segmentation.

Automatic pancreas segmentation is crucial to the diagnostic assessment of diabetes or pancreatic cancer. However, the relatively small size of the pancreas in the upper body, as well as large variations of its location and shape in retroperitoneum, make the segmentation task challenging. To alleviate these challenges, in this article, we propose a cascaded multitask 3-D fully convolution network (FCN) to automatically segment the pancreas.

CT male pelvic organ segmentation using fully convolutional networks with boundary sensitive representation.

Accurate segmentation of the prostate and organs at risk (e.g., bladder and rectum) in CT images is a crucial step for radiation therapy in the treatment of prostate cancer.

Pelvic Organ Segmentation Using Distinctive Curve Guided Fully Convolutional Networks.

Accurate segmentation of pelvic organs (i.e., prostate, bladder, and rectum) from CT image is crucial for effective prostate cancer radiotherapy.

Pelvic Organ Segmentation Using Distinctive Curve Guided Fully Convolutional Networks.

Accurate segmentation of pelvic organs (i.e., prostate, bladder and rectum) from CT image is crucial for effective prostate cancer radiotherapy.

Evaluation of PET/MRI for Tumor Volume Delineation for Head and Neck Cancer.

Introduction: Computed tomography (CT), combined positron emitted tomography and CT (PET/CT), and magnetic resonance imaging (MRI) are commonly used in head and neck radiation planning. Hybrid PET/MRI has garnered attention for potential added value in cancer staging and treatment planning. Herein, we compare PET/MRI vs.