Publications by authors named "Keith Booher"

Spinal cord injury creates an inflammatory microenvironment that regulates the capacity of transplanted human Neural Stem Cells (hNSC) to migrate, differentiate, and repair injury. Despite similarities in gene expression and markers detected by immunostaining, hNSC populations exhibit heterogeneous therapeutic potential. This heterogeneity derives in part from the epigenetic landscape in the hNSC genome, specifically methylation (5mC) and hydroxymethylation (5hmC) state, which may affect the response of transplanted hNSC in the injury microenvironment and thereby modulate repair capacity.

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Xenon (Xe) has shown great potential as a stroke treatment due to its exceptional ability to protect brain tissue without inducing side effects. We have previously developed Xe-loaded liposomes for the ultrasound-activated delivery of Xe into the cerebral region and demonstrated their therapeutic efficacy. At present, the sole FDA-approved thrombolytic agent for stroke treatment is recombinant tissue plasminogen activator (rtPA).

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Article Synopsis
  • - Genetic testing is crucial for identifying suspects and correcting wrongful convictions, but it currently can't determine the age of DNA samples, which could aid in the investigation process.
  • - This study demonstrates that analyzing cytosine methylation in DNA can effectively estimate the age of blood samples from crime scenes, showing significant correlation between predicted and known ages.
  • - Novel techniques such as targeted methylation and whole-genome bisulfite sequencing can enhance forensic analysis by not only identifying individuals involved in a crime but also providing information about their age.
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Objective: To evaluate the epigenetic consequence on the methylome and subsequent transcriptome in euploid blastocysts of male-factor (MF) infertility patients.

Design: Methylome and transcriptome analysis on individual oligoasthenoteratozoospermia (OAT [MF]) blastocysts.

Setting: Infertility clinic.

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Article Synopsis
  • - Cytosine methylation is a key epigenetic modification in DNA that influences normal physiology and diseases, but its relationship with sex differences has been underexplored.
  • - Analysis of DNA methylation in various tissues from male and female mice revealed significant sexual dimorphism, with numerous loci exhibiting differences primarily driven by higher methylation levels in females, independent of testosterone in some cases.
  • - The study suggests that sex influences epigenetic states in a tissue-specific manner, which could have important implications for understanding differences in health and disease between genders.
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Methionine and homocysteine are metabolites in the transmethylation pathway leading to synthesis of the methyl-donor S-adenosylmethionine (SAM). Most cancer cells stop proliferating during methionine stress conditions, when methionine is replaced in the growth media by its immediate metabolic precursor homocysteine (Met-Hcy+). Non-transformed cells proliferate in Met-Hcy+ media, making the methionine metabolic requirement of cancer cells an attractive target for therapy, yet there is relatively little known about the molecular mechanisms governing the methionine stress response in cancer cells.

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An epitope tag introduced to a gene of interest (GOI) greatly increases the ease of studying cellular proteins. Rapid PCR-based strategies for epitope tagging a protein's C-terminus at its native gene locus are widely used in yeast. C-terminal epitope tagging is not suitable for all proteins, however.

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This chapter describes the different methods used for localization of proteins and organelles in Pichia pastoris. A series of plasmids and a modified immunofluorescence protocol for localization and co-localization of proteins and organelles are described. Also included are protocols for the labeling of different subcellular organelles with vital stains.

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