Publications by authors named "Keiko Nishikawa"

Tuberous sclerosis complex (TSC) is an intractable inherited disease caused by a germline mutation in either the TSC complex subunit 1 () or tumor suppressor genes. Recent progress in the treatment of TSC with rapamycin has provided benefits to patients with TSC. However, the complete elimination of tumors is difficult to achieve as regrowth often occurs after a drug is suspended; thus, more efficient medication and novel therapeutic targets are required.

View Article and Find Full Text PDF

The tuberous sclerosis complex (TSC) gene products (TSC1/TSC2) negatively regulate mTORC1. Although mTORC1 inhibitors are used for the treatment of TSC, incomplete tumor elimination and the adverse effects from long-term administration are problems that need to be solved. Branched-chain amino acid (BCAA) metabolism is involved in the growth of many tumor cells via the mTORC1 pathway.

View Article and Find Full Text PDF
Article Synopsis
  • A study revealed that a blend of PBnMA and [Cmim][NTf] undergoes LCST-type phase separation, indicating unique solute-solvent interactions.
  • High-resolution magic-angle spinning NMR spectroscopy helped identify PBnMA peaks not seen in standard NMR, while SAXS analysis showed PBnMA adopts a random coil conformation in the ionic liquid.
  • The findings suggest that the low mobility of the polymer chains is linked to the decoupled conductivity of the ionic liquid in the polymer matrix, with temperature fluctuations affecting the interaction between the two components.
View Article and Find Full Text PDF

Inhomogeneous distribution of constituent molecules in a mixed solvent has been known to give remarkable effects on the solute, e.g., conformational changes of biomolecules in an alcohol-water mixture.

View Article and Find Full Text PDF

The phase behavior of a representative ammonium-based ionic liquid, trimethylpropylammonium bis(fluorosulfonyl)amide ([N1113][FSA]), was investigated using a laboratory-made differential scanning calorimeter (DSC). The apparatus possesses extremely high sensitivities with stability of ±2 nW in thermal flux and ±1 mK in temperature and a very slow scanning rate of 0.001 mK s-1 in the slowest scanning speed.

View Article and Find Full Text PDF

Malignant mesothelioma (MM) is an aggressive malignant neoplasm which rapidly invades pleural tissues and has a poor prognosis. Here, we explore enhancement of the effect of irinotecan [camptothecin-11 (CPT-11)] by the p53-dependent induction of carboxylesterase 2 (CES2), a CPT-11-activating enzyme, in MM. The level of CES2 mRNA was greatly increased on treatment with nutlin-3a.

View Article and Find Full Text PDF

Background: Helicobacter pylori (H. pylori) gastritis could cause dyspepsia, and eradication is recommended as the first-line treatment. Patients who continuously have their symptoms under control > 6 months after eradication are defined as having H.

View Article and Find Full Text PDF

A novel analytical method was developed for the determination of free asparagine (Asn), which is a precursor of acrylamide, in grains. Asn was extracted from a sample with 5% (w/v) aqueous trichloroacetic acid solution, and the crude extract was cleaned up using a reversed-phase solid-phase cartridge. The cleaned extract was derivatized with dansyl chloride and analyzed by HPLC-UV.

View Article and Find Full Text PDF

We applied what we call the "1-propanol (1P) probing methodology" on the effects of H and OH on liquid HO. We found that H is an amphiphile with a modest hydrophobic and an equally modest hydrophilic contribution. Its hydration number is 2 ± 1, suggesting that the equilibrium hydration structure is like the Zundel type (HO).

View Article and Find Full Text PDF

We have studied the mixing scheme of an aqueous solution of ionic liquid tetrabutylphosphonium trifluoroacetate, [P]CFCOO, in the water-rich region. The mixture shows phase separation with a lower critical solution temperature. To learn how the solute [P]CFCOO species interact with each other in the dilute region, the third derivative quantities of Gibbs energy in terms of enthalpy, H, and volume, V, are evaluated.

View Article and Find Full Text PDF

The flexibility and conformational variety of the butyl group in cations of ionic liquids (ILs) play an important role in dictating the macroscopic and microscopic properties of ILs. Here we calculate potential energy surfaces for the dihedral angles of the butyl group in four different types of cyclic cations, imidazolium, pyridinium, pyrrolidinium, and piperidinium, using the density functional theory method. The calculation results highlight the role of the butyl group in these cations by comparison of five-membered and six-membered rings, and of aromatic and alicyclic rings, in terms of stable conformations and rotational barriers.

View Article and Find Full Text PDF

By use of pulse NMR methods, the temperature dependences of the longitudinal and transverse relaxation times for (1)H and (19)F were measured for the three phases of 1-butyl-1-methylpiperidinium bis(fluorosulfonyl)amide ([Pip1,4][FSA]), i.e., liquid or supercooled liquid, Cryst-α, and Cryst-β, to investigate the ion dynamics and phase behavior related to the dynamics.

View Article and Find Full Text PDF

The sputter deposition of metals in an ionic liquid (IL) capture medium is a simple and elegant method for preparing nanoparticles without any chemical reaction. Although there have been some reports on the size determination factors for Au nanoparticles (AuNPs) prepared using this method, the effects with respect to the type of IL used have not been clearly elucidated. This is because there are some complicating factors, some of which have been revealed by our previous systematic studies.

View Article and Find Full Text PDF

The structural flexibility and conformational variety of the ions in room-temperature ionic liquids (RTILs) have significant effects on their physicochemical properties. To begin a systematic study of the thermodynamic properties of nonaromatic RTILs, 1-methyl-1-butylpiperidinium bis(fluorosulfonyl)amide ([Pip1,4][FSA]) was selected as the first sample. In addition to the rotational flexibility of the alkyl group, the [Pip1,4](+) cation has characteristic ring-flipping flexibility, which is very different from the behavior of the well-studied imidazolium-based cations.

View Article and Find Full Text PDF

We report the results of a comprehensive (81)Br NMR spectroscopic study of the structure and dynamics of two room temperature ionic liquids (RTILs), 1-butyl-3-methylimidazolium bromide ([C(4)mim]Br) and 1-butyl-2,3-dimethylimidazolium bromide ([C(4)C(1)mim]Br), in both liquid and crystalline states. NMR parameters in the gas phase are also simulated for stable ion pairs using quantum chemical calculations. The combination of (81)Br spin-lattice and spin-spin relaxation measurements in the motionally narrowed region of the stable liquid state provides information on the correlation time of the translational motion of the cation.

View Article and Find Full Text PDF

Some of the important factors that characterise room-temperature ionic liquids (RTILs) are the variety of conformations adopted by the constituent ions and their flexibility. Using 1,3-dimethylimidazolium bis(fluorosulfonyl)amide ([C1mim][FSA]) and 1,3-dimethylimidazolium bis(trifluoromethylsulfonyl)amide ([C1mim][NTf2]) as samples, the longitudinal and transverse relaxation times (T1 and T2) for (19)F and (1)H were determined as a function of temperature and were correlated with the dynamics of the phase behaviours of the two RTILs. Because the anions and cations in the two compounds have (19)F and (1)H nuclei, respectively, their dynamics can be independently investigated and the relationships between them can be discussed.

View Article and Find Full Text PDF

To extract protein-protein interaction from experimental small-angle scattering of proteins in solutions using liquid state theory, a model potential consisting of a hard-sphere repulsive potential and the excess interaction potential has been introduced. In the present study, we propose a model-potential-free integral equation method that extracts the excess interaction potential by using the experimental small-angle scattering data without specific model potential such as the Derjaguin-Landau-Verwey-Overbeek (DLVO)-type model. Our analysis of experimental small-angle X-ray scattering data for lysozyme solution shows both the stabilization of contact configurations of protein molecules and a large activation barrier against the formation of the contact configurations in addition to the screened Coulomb repulsion.

View Article and Find Full Text PDF

Objective: We earlier found that TNFα but not interleukin (IL)-17 is indispensable in the pathogenesis of spontaneously occurring rheumatoid arthritis (RA)-like disease in our newly established FcγRIIB-deficient C57BL/6 (B6) mouse model, designated KO1. Here, we examined the role of IL-6 in the pathogenesis of RA features in KO1, with particular reference to cartilage and bone destruction in arthritic joints.

Methods: To evaluate the preventive effect of MR16-1, a rat anti-mouse IL-6 receptor (IL-6R) mAb, 4-month-old preclinical KO1 mice were divided into three groups: the first treated with MR16-1 for 6 months, the second treated with normal rat IgG, as a control, and the third left untreated.

View Article and Find Full Text PDF

We characterized the effects of K(+) and Cs(+) ions on the molecular organization of H2O by the 1-propanol probing methodology, previously developed by us (Phys. Chem. Chem.

View Article and Find Full Text PDF

Objective: TNFα and IL-17 have been shown to be the major inflammatory cytokines involved in the pathogenesis of rheumatoid arthritis (RA). Here, we examined the effect of these cytokines on spontaneously occurring RA in our newly established arthritis-prone FcγRIIB- deficient C57BL/6 (B6) mice, designated KO1, by introducing genetic deficiency of TNFα and IL-17 into KO1 mice.

Methods: KO1.

View Article and Find Full Text PDF

Toward understanding intermolecular interactions governing self-association of proteins, the present study investigated a model protein, myoglobin, using a small-angle X-ray scattering technique. It has been known that removal of the heme makes myoglobin aggregation-prone. The interparticle interferences of the holomyoglobin and the apomyoglobin were compared in terms of the structure factor.

View Article and Find Full Text PDF

We previously established an IgG Fc receptor IIB (FcγRIIB)-deficient C57BL/6 (B6)-congenic mouse strain (KO1), which spontaneously develops rheumatoid arthritis (RA), but not systemic lupus erythematosus (SLE). Here, we show that when Y chromosome-linked autoimmune acceleration (Yaa) mutation was introduced in KO1 strain (KO1.Yaa), the majority of KO1.

View Article and Find Full Text PDF

The effect of tetraethylammonium chloride (TEAC) on H(2)O was investigated by the 1-propanol (1P) probing thermodynamic methodology developed by us earlier. It was found that TEAC is an amphiphile with a small hydrophobic and a dominant hydrophilic contribution. An earlier application of the same 1P-probing methodology to tetramethylammonium chloride (TMAC) indicated that the latter is as hydrophilic as urea without any hydrophobic contribution.

View Article and Find Full Text PDF

The rotational dynamics of the hexafluorophosphate anion (PF(6)(-)) in the crystalline and liquid states of the archetypal room temperature ionic liquid (RTIL) 1-butyl-3-methylimidazolium hexafluorophosphate ([C(4)mim]PF(6)) are investigated using (31)P NMR spectroscopy line shape analyses and spin-lattice relaxation time measurements. The PF(6)(-) anion performs isotropic rotation in all three polymorphic crystals phases α, β, and γ as well as in the liquid state with a characteristic time scale that ranges from a few ps to a few hundred ps over a temperature range of 180-280 K. The rotational correlation time τ(c) for PF(6)(-) rotation follows the sequence γ-phase < α-phase ≈ liquid < β-phase.

View Article and Find Full Text PDF

We developed a determination method for sphingoid bases using online post-column high-performance liquid chromatography (HPLC) with O-phthalaldehyde (OPA) derivatization. Good separation was achieved using a reversed-phase column and eluting with 50% acetonitrile containing formic acid and heptafluorobutyric acid. Using these conditions, an excellent linearity (R² > 0.

View Article and Find Full Text PDF