Individuality Through Ecology: Rethinking the Evolution of Complex Life From an Externalist Perspective.

The evolution of complex life forms, exemplified by multicellular organisms, can be traced through a series of evolutionary transitions in individuality, beginning with the origin of life, followed by the emergence of the eukaryotic cell, and, among other transitions, culminating in the shift from unicellularity to multicellularity. Several attempts have been made to explain the origins of such transitions, many of which have been internalist (i.e.

Stability of ecologically scaffolded traits during evolutionary transitions in individuality.

Evolutionary transitions in individuality are events in the history of life leading to the emergence of new levels of individuality. Recent studies have described an ecological scaffolding scenario of such transitions focused on the evolutionary consequences of an externally imposed renewing meta-population structure with limited dispersal. One difficulty for such a scenario has been explaining the stability of collective-level traits when scaffolding conditions no longer apply.

Bet hedging in a unicellular microalga.

Understanding how organisms have adapted to persist in unpredictable environments is a fundamental goal in biology. Bet hedging, an evolutionary adaptation observed from microbes to humans, facilitates reproduction and population persistence in randomly fluctuating environments. Despite its prevalence, empirical evidence in microalgae, crucial primary producers and carbon sinks, is lacking.

Active in vivo translocation of the Methanosarcina mazei Gö1 Casposon.

Casposons are transposable elements containing the CRISPR associated gene Cas1solo. Identified in many archaeal genomes, casposons are discussed as the origin of CRISPR-Cas systems due to their proposed Cas1solo-dependent translocation. However, apart from bioinformatic approaches and the demonstration of Cas1solo integrase and endonuclease activity in vitro, casposon transposition has not yet been shown in vivo.

An environmentally induced multicellular life cycle of a unicellular cyanobacterium.

Understanding the evolutionary transition to multicellularity is a key problem in biology. Nevertheless, the ecological conditions driving such transitions are not well understood. The first known transition to multicellularity occurred 2.

Tradeoff breaking as a model of evolutionary transitions in individuality and limits of the fitness-decoupling metaphor.

Evolutionary transitions in individuality (ETIs) involve the formation of Darwinian collectives from Darwinian particles. The transition from cells to multicellular life is a prime example. During an ETI, collectives become units of selection in their own right.

Essential gene acquisition destabilizes plasmid inheritance.

Extra-chromosomal genetic elements are important drivers of evolutionary transformations and ecological adaptations in prokaryotes with their evolutionary success often depending on their 'utility' to the host. Examples are plasmids encoding antibiotic resistance genes, which are known to proliferate in the presence of antibiotics. Plasmids carrying an essential host function are recognized as permanent residents in their host.

Enhancing Microbial Pollutant Degradation by Integrating Eco-Evolutionary Principles with Environmental Biotechnology.

Environmental accumulation of anthropogenic pollutants is a pressing global issue. The biodegradation of these pollutants by microbes is an emerging field but is hampered by inefficient degradation rates and a limited knowledge of potential enzymes and pathways. Here, we advocate the view that significant progress can be achieved by harnessing artificial community selection for a desired biological process, an approach that makes use of eco-evolutionary principles.

Corrigendum: Exploring the Niche Concept in a Simple Metaorganism.

[This corrects the article DOI: 10.3389/fmicb.2020.

The Order of Trait Emergence in the Evolution of Cyanobacterial Multicellularity.

The transition from unicellular to multicellular organisms is one of the most significant events in the history of life. Key to this process is the emergence of Darwinian individuality at the higher level: Groups must become single entities capable of reproduction for selection to shape their evolution. Evolutionary transitions in individuality are characterized by cooperation between the lower level entities and by division of labor.

Exploring the Niche Concept in a Simple Metaorganism.

Organisms and their resident microbial communities - the microbiome - form a complex and mostly stable ecosystem. It is known that the composition of the microbiome and bacterial species abundances can have a major impact on host health and , but the processes that lead to these microbial patterns have not yet been identified. We here apply the niche concept and trait-based approaches as a first step in understanding the patterns underlying microbial community assembly and structure in the simple metaorganism .

Antibiotics Interfere with the Evolution of Plasmid Stability.

Extra-chromosomal genetic elements are important drivers of bacterial evolution, and their evolutionary success depends on positive selection for the genes they encode. Examples are plasmids encoding antibiotic resistance genes that are maintained in the presence of antibiotics (e.g.

Microbial Species Coexistence Depends on the Host Environment.

Organisms and their resident microbial communities form a complex and mostly stable ecosystem. It is known that the specific composition and abundance of certain bacterial species affect host health and fitness, but the processes that lead to these microbial patterns are unknown. We investigate this by deconstructing the simple microbiome of the freshwater polyp We contrast the performance of its two main bacterial associates, and , on germfree hosts with two environments over time.

Meta-population structure and the evolutionary transition to multicellularity.

The evolutionary transition to multicellularity has occurred on numerous occasions, but transitions to complex life forms are rare. Here, using experimental bacterial populations as proxies for nascent multicellular organisms, we manipulate ecological factors shaping the evolution of groups. Groups were propagated under regimes requiring reproduction via a life cycle replete with developmental and dispersal (propagule) phases, but in one treatment lineages never mixed, whereas in a second treatment, cells from different lineages experienced intense competition during the dispersal phase.

Regular Wounding in a Natural System: Bacteria Associated With Reproductive Organs of Bedbugs and Their Quorum Sensing Abilities.

During wounding, tissues are disrupted so that bacteria can easily enter the host and trigger a host response. Both the host response and bacterial communication can occur through quorum sensing (QS) and quorum sensing inhibition (QSI). Here, we characterize the effect of wounding on the host-associated bacterial community of the bed bug.

Plasticity first: molecular signatures of a complex morphological trait in filamentous cyanobacteria.

Background: Filamentous cyanobacteria that differentiate multiple cell types are considered the peak of prokaryotic complexity and their evolution has been studied in the context of multicellularity origins. Species that form true-branching filaments exemplify the most complex cyanobacteria. However, the mechanisms underlying the true-branching morphology remain poorly understood despite of several investigations that focused on the identification of novel genes or pathways.

An evolutionary perspective on plasmid lifestyle modes.

Plasmids are extra-chromosomal genetic elements whose ecology and evolution depend on their genetic repertoire and interaction with the host. We review the events that lead to transitions between plasmid lifestyle modes - invasion, host range, plasmid persistence and adaptation - from a plasmid perspective. Plasmid lifestyle is determined by various traits, including mobility, stability and indispensability that vary in their magnitude.

Life cycles, fitness decoupling and the evolution of multicellularity.

Cooperation is central to the emergence of multicellular life; however, the means by which the earliest collectives (groups of cells) maintained integrity in the face of destructive cheating types is unclear. One idea posits cheats as a primitive germ line in a life cycle that facilitates collective reproduction. Here we describe an experiment in which simple cooperating lineages of bacteria were propagated under a selective regime that rewarded collective-level persistence.

When to go: optimization of host switching in parasites with complex life cycles.

Many trophically transmitted parasites have complex life cycles: they pass through at least one intermediate host before reproducing in their final host. Despite their economic and theoretical importance, the evolution of such cycles has rarely been investigated. Here, combining a novel modeling approach with experimental data, we show for the first time that an optimal transfer time between hosts exists for a "model parasite," the tapeworm Schistocephalus solidus, from its first (copepod) to its second (fish) intermediate host.

Ecological immunology of a tapeworms' interaction with its two consecutive hosts.

Host-parasite interactions in parasites with complex life cycles have recently gained much interest. Here, we take an evolutionary ecologist's perspective and analyse the immunological interaction of such a parasite, the model tapeworm Schistocephalus solidus, with its two intermediate hosts, a cyclopoid copepod and the three-spined stickleback. We will be focussing especially on the parallel links between the different phases during an infection in the different hosts; the immunological interactions between host(s) and parasite; and their impact on parasite establishment, growth, host manipulation and parasite virulence in the next host in the cycle.

When should a trophically transmitted parasite manipulate its host?

We investigate evolution of two categories of adaptive host manipulation by trophically transmitted helminths: (1) predation suppression decreases the host's mortality before the helminth is capable of establishing in its next host; (2) predation enhancement increases the existing host's mortality after it can establish in its next host. If all parasite mortality is purely random (time-independent), enhancement must increase predation by the next host sufficiently more (depending on manipulative costs) than it increases the average for all forms of host mortality; thus if host and parasite die only through random predation, manipulation must increase the "right" predation more than the "wrong" predation. But if almost all parasites die in their intermediate host through reaching the end of a fixed life span, enhancement can evolve if it increases the right predation, regardless of how much it attracts wrong predators.

Who is in control of the stickleback immune system: interactions between Schistocephalus solidus and its specific vertebrate host.

The cestode Schistocephalus solidus is a frequent parasite of three-spined sticklebacks and has a large impact on its host's fitness. Selection pressure should therefore be high on stickleback defence mechanisms, like an efficient immune system, and also on parasite strategies to overcome these. Even though there are indications for manipulation of the immune system of its specific second intermediate host by the cestode, nothing is yet known about the chronology of specific interactions of S.

Schistocephalus solidus: establishment of tapeworms in sticklebacks--fast food or fast lane?

The penetration of the intestinal mucosal wall is supposed to be critical for helminth parasite infestation, but has rarely been analyzed in detail. We here studied the establishment process of Schistocephalus solidus tapeworms in their second intermediate host, the three-spined stickleback, from oral uptake after experimental exposure, to passage through the gastro-intestinal tract and arrival in the fish body cavity. Using histological techniques, we found tapeworms to penetrate the intestine within 14-24 h, spending most of the time in the stomach lumen and only a very short period in the intestine.