Publications by authors named "Katerina Jirku Pomajbikova"

Article Synopsis
  • Lactiplantibacillus plantarum HEAL9 and Lacticaseibacillus paracasei 8700:2 were studied for their effects on single-cell parasites, specifically Blastocystis, in children with celiac disease autoimmunity after 6 months of supplementation.
  • A total of 78 Swedish children participated in a randomized trial, with stool samples analyzed for parasite presence using advanced sequencing methods.
  • The study found three single-cell protists, notably Dientamoeba fragilis and Blastocystis, but no significant changes in their levels were observed due to probiotic use; however, the presence of these protists was linked to increased diversity in the gut bacteria.
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The avoidance of infectious disease by widespread use of 'systems hygiene', defined by hygiene-enhancing technology such as sewage systems, water treatment facilities, and secure food storage containers, has led to a dramatic decrease in symbiotic helminths and protists in high-income human populations. Over a half-century of research has revealed that this 'biota alteration' leads to altered immune function and a propensity for chronic inflammatory diseases, including allergic, autoimmune and neuropsychiatric disorders. A recent Ethiopian study (EClinicalMedicine 39: 101054), validating predictions made by several laboratories, found that symbiotic helminths and protists were associated with a reduced risk of severe COVID-19 (adjusted odds ratio = 0.

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Cysts and trophozoites of vestibuliferid ciliates and larvae of Strongyloides were found in fecal samples from captive orangutans Pongo pygmaeus and P. abelii from Czech and Slovak zoological gardens. As comparative material, ciliates from semi-captive mandrills Mandrillus sphinx from Gabon were included in the study.

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Article Synopsis
  • Blastocystis is the most common intestinal protist globally, and identifying its subtypes is crucial for understanding its impact on human health and epidemiology.
  • A study comparing the sensitivity of conventional PCR (cPCR) and quantitative PCR (qPCR) in 288 stool samples showed that qPCR detected more positive cases due to higher fecal loads of Blastocystis.
  • Additionally, next-generation sequencing (NGS) demonstrated higher sensitivity for identifying mixed subtypes compared to traditional Sanger sequencing, making the combination of qPCR and NGS valuable for future research and public health monitoring.
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In a single human gut, which is estimated to produce 1000-times more bacteria in a single day than the entire human population on Earth as of 2020, the potential for evolution is vast. In addition to the sheer volume of reproductive events, prokaryotes can transfer most genes horizontally, greatly accelerating their potential to evolve. In the face of this evolutionary potential, Westernization has led to profound changes in the ecosystem of the gut, including increased chronic inflammation in many individuals and dramatically reduced fiber consumption and decreased seasonal variation in the diet of most individuals.

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The virtually complete loss of intestinal worms, known as helminths, from Western society has resulted in elimination of a range of helminth-induced morbidities. Unfortunately, that loss has also led to inflammation-associated deficiencies in immune function, ultimately contributing to widespread pandemics of allergies, autoimmunity, and neuropsychiatric disorders. Several socio-medical studies have examined the effects of intentional reworming, or self-treatment with helminths, on a variety of inflammation-related disorders.

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Several parasite species are shared between humans and pigs. We explored the application of next-generation sequencing-based metabarcoding supplemented with real-time PCR to fecal DNAs from 259 samples from 116 pigs in Denmark to detect and differentiate single-celled intestinal parasites of zoonotic relevance. , , and were observed in 34/37 (92%), 148/259 (57%), and 86/259 (33%) samples, respectively.

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Article Synopsis
  • Protists, like the intestinal eukaryote being studied, coexist with gut bacteria and can have varying health impacts depending on factors like host health and genetics, with evidence suggesting they are mainly harmless in healthy individuals, particularly compared to those with inflammatory diseases.* -
  • Research involves using a rat model to analyze how colonizing with this protist affects gut health and microbiota during inflammation, specifically using an agent to induce colitis after short- and long-term colonization periods.* -
  • Findings indicate that while short-term colonization does not significantly impact gut inflammation, long-term colonization contributes to faster recovery from colitis, reducing inflammation markers and improving clinical scores in affected rats.*
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Colonization by the benign tapeworm, , has been associated with a reduction in intestinal inflammation and changes in bacterial microbiota. However, the role of microbiota in the tapeworm anti-inflammatory effect is not yet clear, and the aim of this study was to determine whether disruption of the microflora during worm colonization can affect the course of intestinal inflammation. We added a phase for disrupting the intestinal microbiota using antibiotics to the experimental design for which we previously demonstrated the protective effect of .

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Unlabelled: sp. is a common intestinal protist colonizing the human intestine the prevalence of which varies across non-industrialized and industrialized countries. Its role in the human gut ecosystem remains unclear due to persisting gaps in knowledge of epidemiology and factors affecting gut colonization.

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The eye nematode Thelazia callipaeda Railliet et Henry, 1910 (Spirurida: Thelaziidae) is a vector-borne zoonotic nematode infecting a range of wild and domestic carnivores as well as humans. It is considered to be a causative agent of emerging and neglected disease and currently invades central part of Europe. Nematodes were collected from the eye of a dog living in Prague, which never travelled outside the Czech Republic.

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Studies in animal models and humans suggest that intentional exposure to helminths or helminth-derived products may hold promise for treating chronic inflammatory-associated diseases (CIADs). Although the mechanisms underlying 'helminth therapy' are being evaluated, little attention has been paid to the actual organisms in use. Here we examine the notion that, because of the complexity of biological symbiosis, intact helminths rather than helminth-derived products are likely to prove more useful for clinical purposes.

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Article Synopsis
  • Hymenolepis diminuta, a common cestode found in wild rat populations, is rarely harmful to humans and has been researched for its potential benefits.
  • Recent studies suggest that this organism may protect against inflammation-related disorders, making it a promising candidate for helminth therapy aimed at treating inflammatory diseases in Western societies.
  • Genetic analysis of laboratory strains reveals that the isolates considered for therapy in the US and Europe are nearly genetically uniform, differing little from wild-caught versions, indicating a low level of diversity among them.
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Blastocystis is a common inhabitant of the human gut, colonizing at least one billion people at a prevalence ranging from <10% to 100% in healthy human populations globally. The majority of carriers remain asymptomatic, suggesting that Blastocystis is largely a commensal, though Blastocystis has also been implicated in disease in some people. However, there are no in vivo model systems in which to experimentally test the impact of Blastocystis on mammalian hosts and the gut ecosystem and determine which factors underlie these variable clinical outcomes.

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Article Synopsis
  • The tapeworm Hymenolepis diminuta serves as a model to study how it affects the mammalian immune system, particularly its potential therapeutic benefits for immune-mediated inflammatory diseases (IMIDs).
  • In mouse studies, H. diminuta has shown protective effects against inflammatory colitis by triggering a strong type 2 immune response aimed at expelling the immature worm, whereas rats, its definitive hosts, develop a milder immune response without significant colitis relief.
  • Research indicates that while immature H. diminuta can activate a type 2 response in rats, only mature H. diminuta significantly reduces inflammation and clinical symptoms of colitis, suggesting different life cycle stages of the worm play distinct roles in immune interactions.
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Infectious diseases including those caused by parasites can be a major threat to the conservation of endangered species. There is thus a great need for studies describing parasite infections of these species in the wild. Here we present data on parasite diversity in an agile mangabey (Cercocebus agilis) group in Bai Hokou, Dzanga-Sangha Protected Areas (DSPA), Central African Republic.

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Helminths and bacteria are major players in the mammalian gut ecosystem and each influences the host immune system and health. Declines in helminth prevalence and bacterial diversity appear to play a role in the dramatic rise of immune mediated inflammatory diseases (IMIDs) in western populations. Helminths are potent modulators of immune system and their reintroduction is a promising therapeutic avenue for IMIDs.

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To address the molecular diversity and occurrence of pathogenic species of the genus Entamoeba spp. in wild non-human primates (NHP) we conducted molecular-phylogenetic analyses on Entamoeba from wild chimpanzees living in the Issa Valley, Tanzania. We compared the sensitivity of molecular [using a genus-specific polymerase chain reaction (PCR)] and coproscopic detection (merthiolate-iodine-formaldehyde concentration) of Entamoeba spp.

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The ciliate, Buxtonella sulcata, was isolated from a bull cow near Tišnov, Czech Republic, and fixed for light (LM), scanning electron (SEM) and transmission electron microscopic (TEM) study. Presented here are the basic morphometrics from LM study, and the fine-structure of both somatic and vestibular ciliary, and other structures. While many morphological features are similar to ciliates belonging to the order Vestibuliferida, some differences have been discovered, and are presented here.

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Although wild chimpanzees and other African great apes live in regions endemic for African sleeping sickness, very little is known about their trypanosome infections, mainly due to major difficulties in obtaining their blood samples. In present work, we established a diagnostic ITS1-based PCR assay that allows detection of the DNA of all four Trypanosoma brucei subspecies (Trypanosoma brucei brucei, Trypanosoma brucei rhodesiense, Trypanosoma brucei gambiense, and Trypanosoma brucei evansi) in feces of experimentally infected mice. Next, using this assay we revealed the presence of trypanosomes in the fecal samples of wild chimpanzees and this finding was further supported by results obtained using a set of primate tissue samples.

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