Publications by authors named "Kallay M"

The complex formation of the cationic stilbene-type photoswitch CP with the anionic macrocycles carboxylato-pillar[5]arene (WP5) and carboxylato-pillar[6]arene (WP6) has been investigated in aqueous solution by optical spectroscopic, NMR and isothermal calorimetric experiments and theoretical calculations. Subsequently, the photoisomerization reactions of the supramolecular complexes formed have been studied. CP consists of a 7-diethylamino-coumarin fluorophore and an -methylpyridinium unit, which are connected via an ethene bridge.

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Background: Adherence to study interventions is critical to the conduct of randomized controlled trials (RCTs). The relationships between participant characteristics and intervention adherence are understudied in pregnant populations. The purpose of this study was to conduct a secondary analysis of adherence to study capsules in a double-masked, placebo-controlled RCT of a probiotic intervention to reduce antenatal Group B Streptococcus colonization, in relationship to participant characteristics.

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The calculation of density-based basis-set correction (DBBSC), which remedies the basis-set incompleteness (BSI) error of the correlation energy, is combined with local approximations. Aiming at large-scale applications, the procedure is implemented in our efficient local natural orbital-based coupled-cluster singles and doubles with perturbative triples [LNO-CCSD(T)] scheme. To this end, the range-separation function, which characterizes the one-electron BSI in space, is decomposed into the sum of contributions from individual localized molecular orbitals (LMOs).

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The natural auxiliary function (NAF) approach is an approximation to decrease the size of the auxiliary basis set required for quantum chemical calculations utilizing the density fitting technique. It has been proven efficient to speed up various correlation models, such as second-order Møller-Plesset (MP2) theory and coupled-cluster methods. Here, for the first time, we discuss the theory of analytic derivatives for correlation methods employing the NAF approximation on the example of MP2.

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The projected atomic orbital (PAO) technique is presented for the construction of virtual orbital spaces in projection-based embedding (PbE) applications. The proposed straightforward procedure produces a set of virtual orbitals that are used in the final, high-level calculation of the embedded active subsystem. The PAO scheme is demonstrated on intermolecular potentials of bimolecular complexes in ground and excited states, including Rydberg excitations.

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The theory of analytic gradients is presented for the projector-based density functional theory (DFT) embedding approach utilizing the Huzinaga-equation. The advantages of the Huzinaga-equation-based formulation are demonstrated. In particular, it is shown that the projector employed does not appear in the Lagrangian, and the potential risk of numerical problems is avoided at the evaluation of the gradients.

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A thorough comparison is carried out for explicitly correlated and density-based basis-set correction approaches, which were primarily developed to mitigate the basis-set incompleteness error of wave function methods. An efficient implementation of the density-based scheme is also presented, utilizing the density-fitting approximation. The performance of these approaches is comprehensively tested for the second-order Møller-Plesset (MP2), coupled-cluster singles and doubles (CCSD), and CCSD with perturbative triples [CCSD(T)] methods with respect to the corresponding complete basis set references.

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The extension of the highly optimized local natural orbital (LNO) coupled cluster (CC) with single-, double-, and perturbative triple excitations [LNO-CCSD(T)] method is presented for high-spin open-shell molecules based on restricted open-shell references. The techniques enabling the outstanding efficiency of the closed-shell LNO-CCSD(T) variant are adopted, including the iteration- and redundancy-free second-order Møller-Plesset and (T) formulations as well as the integral-direct, memory- and disk use-economic, and OpenMP-parallel algorithms. For large molecules, the efficiency of our open-shell LNO-CCSD(T) method approaches that of its closed-shell parent method due to the application of restricted orbital sets for demanding integral transformations and a novel approximation for higher-order long-range spin-polarization effects.

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1,1,6-Trimethyl-1,2-dihydronaphthalene (TDN) is known to give a petrol note when smelling and tasting wine, which is most pronounced in Riesling varieties. Its increasing concentration has been linked to climate change. In the present work, a gas chromatographic method was used to quantify free TDN in "Italian Riesling", "Rhine Riesling", and "Kéknyelű" wines from Hungary.

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The junChS-F12 composite method has been improved by means of the latest implementation of the CCSD(F12*)(T+) ansatz and validated for the thermochemistry of molecules containing atoms of the first three rows of the periodic table. A thorough benchmark showed that this model, in conjunction with cost-effective revDSD-PBEP86-D3(BJ) reference geometries, offers an optimal compromise between accuracy and computational cost. If improved geometries are sought, the most effective option is to add MP2-F12 core-valence correlation corrections to CCSD(T)-F12b/jun-cc-pVTZ geometries without the need of performing any extrapolation to the complete basis set limit.

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The double-hybrid (DH) time-dependent density functional theory is extended to vertical ionization potentials (VIPs) and electron affinities (VEAs). Utilizing the density fitting approximation, efficient implementations are presented for the genuine DH ansatz relying on the perturbative second-order correction, while an iterative analogue is also elaborated using our second-order algebraic-diagrammatic construction [ADC(2)]-based DH approach. The favorable computational requirements of the present schemes are discussed in detail.

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Our reduced-cost scheme [ , , 094111] based on the frozen virtual natural orbital and natural auxiliary function approaches is extended to core excitations. The efficiency of the approximation is presented for the second-order algebraic-diagrammatic construction [ADC(2)] method invoking the core-valence separation (CVS) and density fitting approaches. The errors introduced by the present scheme are comprehensively analyzed for more than 200 excitation energies and 80 oscillator strengths, including C, N, and O K-edge excitations, as well as 1 → π* and Rydberg transitions.

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Herein, we present high-yielding, concise access to a set of xanthenium-derived, water-soluble, low-molecular-weight photocages allowing light-controlled cargo release in the green to red region. Very importantly, these new photocages allow installation of various payloads through ester, carbamate, or carbonate linkages even at the last stage of the synthesis. Payloads were uncaged with high efficiency upon green, orange, or red light irradiation, leading to the release of carboxylic acids, phenols, and amines.

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The double-hybrid (DH) time-dependent density functional theory is extended to core excitations. Two different DH formalisms are presented utilizing the core-valence separation (CVS) approximation. First, a CVS-DH variant is introduced relying on the genuine perturbative second-order correction, while an iterative analogue is also presented using our second-order algebraic-diagrammatic construction [ADC(2)]-based DH ansatz.

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We present analytic gradients for local density fitting Hartree-Fock (HF) and hybrid Kohn-Sham (KS) density functional methods. Due to the non-variational nature of the local fitting algorithm, the method of Lagrange multipliers is used to avoid the solution of the coupled perturbed HF and KS equations. We propose efficient algorithms for the solution of the arising Z-vector equations and the gradient calculation that preserve the third-order scaling and low memory requirement of the original local fitting algorithm.

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Several approximations are introduced and tested to reduce the computational expenses of the explicitly correlated coupled-cluster singles and doubles with perturbative triples [CCSD(T)] method for both closed and open-shell species. First, the well-established frozen natural orbital (FNO) technique is adapted to explicitly correlated CC approaches. Second, our natural auxiliary function (NAF) scheme is employed to reduce the size of the auxiliary basis required for the density fitting approximation regularly used in explicitly correlated calculations.

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The performance of multilevel quantum chemical approaches, which utilize an atom-based system partitioning scheme to model various electronic excited states, is studied. The considered techniques include the mechanical-embedding (ME) of "our own N-layered integrated molecular orbital and molecular mechanics" (ONIOM) method, the point charge embedding (PCE), the electronic-embedding (EE) of ONIOM, the frozen density-embedding (FDE), the projector-based embedding (PbE), and our local domain-based correlation method. For the investigated multilevel approaches, the second-order algebraic-diagrammatic construction [ADC(2)] approach was utilized as the high-level method, which was embedded in either Hartree-Fock or a density functional environment.

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In this work, we implemented the embedded cluster reference interaction site model (EC-RISM) originally developed by Kloss, Heil, and Kast ( , 112, 4337-4343). This method combines quantum mechanical calculations with the 3D reference interaction site model (3D-RISM). Numerous options, such as buffer, grid space, basis set, charge model, water model, closure relation, and so forth, were investigated to find the best settings.

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The performance of the most recent density functionals is assessed for charge-transfer (CT) excitations using comprehensive intra- and intermolecular CT benchmark sets with high-quality reference values. For this comparison, the state-of-the-art range-separated (RS) and long-range-corrected (LC) double hybrid (DH) approaches are selected, and global DH and LC hybrid functionals are also inspected. The correct long-range behavior of the exchange-correlation (XC) energy is extensively studied, and various CT descriptors are compared as well.

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Our second-order algebraic-diagrammatic construction [ADC(2)]-based double-hybrid (DH) ansatz ( , , 4440. DOI: 10.1021/acs.

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A new approach is proposed to reduce the basis set incompleteness error of the triple excitation correction in explicitly correlated coupled-cluster singles and doubles with perturbative triples calculations. Our method is similar to the intuitive triples correction approach of Knizia et al. [J.

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Article Synopsis
  • Quantum-mechanical methods like Quantum diffusion Monte Carlo (DMC) and coupled cluster with single, double, and perturbative triple excitations (CCSD(T)) are key for studying molecular interactions in the natural sciences, particularly for small organic molecules.
  • While these methods are reliable for small systems, they show inconsistencies when assessing larger polarizable supramolecules, with interaction energy differences reaching up to 8 kcal mol.
  • This inconsistency highlights the need for more careful evaluation when applying these methods to predict non-covalent interactions in larger molecular structures.
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Our recently presented range-separated (RS) double-hybrid (DH) time-dependent density functional approach [ 927 (2021)] is combined with spin-scaling techniques. The proposed spin-component-scaled (SCS) and scaled-opposite-spin (SOS) variants are thoroughly tested for almost 500 excitations including the most challenging types. This comprehensive study provides useful information not only about the new approaches but also about the most prominent methods in the DH class.

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The goal of this study is to provide insight into the mechanism of the oxygen reduction reaction (ORR) on N-doped graphene surfaces. Using density functional theory and a computational hydrogen electrode model, we studied the energetics of the ORR intermediates, the effect of the position of the reaction site, and the effect of the position of the N modification relative to the active site on model graphene surfaces containing one or two N atoms. We found that scaling relations can be derived for N-doped graphenes as well, but the multiplicity of the surface should be taken into account.

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Several approaches are presented to improve the efficiency of Hartree-Fock and Kohn-Sham self-consistent field (SCF) calculations relying on a simple first-order energy correction reminiscent of the scheme used in dual-basis SCF methods. The basic idea is to perform an initial SCF calculation computing approximate Fock-matrices and, in the final iteration step, to use a more complete Fock-matrix builder together with the energy correction to diminish the error. The approximation is tested for conventional and local density fitting (DF) SCF approaches combining various auxiliary basis sets, fitting metrics, and Fock-matrix construction algorithms in the initial and final iterations as well as for seminumerical SCF methods combining integration grids of different qualities.

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