Publications by authors named "Justyna M Zurek"

Nitrofurans undergo intramolecular Diels-Alder reactions with tethered electron-poor dienophiles more rapidly and in higher yield than non-nitrated furans. Computational studies indicate that increased stabilization of a partial positive charge on the nitro-substituted carbon in both transition state and product is the driving force for these reactions. Frontier molecular orbital energy differences indicate a switch from normal to inverse electron demand upon nitration.

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Simultaneous control of the kinetics and thermodynamics of two different types of covalent chemistry allows pathway selectivity in the formation of hydrogelating molecules from a complex reaction network. This can lead to a range of hydrogel materials with vastly different properties, starting from a set of simple starting compounds and reaction conditions. Chemical reaction between a trialdehyde and the tuberculosis drug isoniazid can form one, two, or three hydrazone connectivity products, meaning kinetic gelation pathways can be addressed.

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Crossed McMurry reactions of bifuran- or bithiophenedicarbaldehydes with bipyrroledicarbaldehydes have been studied for the first time. Only those porphycenic macrocycles derived from homocoupled McMurry products were formed. The results are explained by using both density functional theory and electron propagator computations to model the electron affinity of the dialdehyde starting materials.

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Detailed analysis of calculated data from an experimental/computational study of intramolecular furan Diels-Alder reactions has led to the unusual discovery that the mean contraction of the newly forming C-C σ-bonds from the transition state to the product shows a linear correlation with both reaction Gibbs free energies and reverse energy barriers. There is evidence for a similar correlation in other intramolecular Diels-Alder reactions involving non-aromatic dienes. No such correlation is found for intermolecular Diels-Alder reactions.

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Mechanistic insight into the photo-induced solvent substitution reaction of cis-[Ru(bipyridine)2(nicotinamide)2](2+) (1) is presented. Complex 1 is a photoactive species, designed to display high cytotoxicity following irradiation, for potential use in photodynamic therapy (photochemotherapy). In Ru(II) complexes of this type, efficient population of a dissociative triplet metal-centred ((3)MC) state is key to generating high quantum yields of a penta-coordinate intermediate (PCI) species, which in turn may form the target species: a mono-aqua photoproduct [Ru(bipyridine)2(nicotinamide)(H2O)](2+) (2).

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A theoretical analysis of linear and non-linear (two-photon absorption) electronic spectroscopy of all known porphyrinic pigments has been performed using linear and quadratic density functional response theory, with the long-range corrected CAM-B3LYP functional. We found that higher Soret transitions often contain non-Gouterman contributions and that each chlorophyll has the possibility for resonance enhanced TPA in the Soret region, although there is also significant TPA in the Q region.

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For the first time a comprehensive synthetic and computational study of the effect of halogen substitution on both furan and dienophile for the intramolecular Furan Diels-Alder (IMDAF) reaction has been undertaken. Contrary to our initial expectations, halogen substitution on the dienophile was found to have a significant effect, making the reactions slower and less thermodynamically favourable. However, careful choice of the site of furan halogenation could be used to overcome dienophile halogen substitution, leading to highly functionalised cycloadducts.

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Ultrafast time-resolved velocity map ion imaging (TR-VMI) and time-resolved ion-yield (TR-IY) methods are utilised to reveal a comprehensive picture of the electronic state relaxation dynamics in photoexcited catechol (1,2-dihydroxybenzene). After excitation to the S1 ((1)ππ*) state between 280.5 (the S1 origin band, S1(v = 0)) to 243 nm, the population in this state is observed to decay through coupling onto the S2 ((1)πσ*) state, which is dissociative with respect to the non-hydrogen bonded 'free' O-H bond (labelled O(1)-H).

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Computational studies on the photochemistry of the open-shell chromium oxalate [Cr(C(2)O(4))(3)](3-) ion, including its non-adiabatic relaxation pathways, have been performed. The presence of the peaked conical intersection of a quasi-Jahn-Teller type, connecting the (4)T state with (4)A(2) ground state, accounts for the observed photoinduced racemization. This involves the rupture of one of the Cr-O bonds and the complex forms an unstable trigonal bipyramid form that connects both ground state stereoisomers with the excited quartet manifold.

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We have performed TD-DFT and CASSCF calculations to understand the spectroscopy and reactive photochemistry of the [Cr(tn)(3)](3+) complex. Our results show that, after population of a quartet ligand field excited state, the system relaxes by dissociation of a Cr-N bond to reach a quasi-trigonal bipyramid five-coordinate species that is a conical intersection connecting the excited and ground quartet manifolds. Nonadiabatic relaxation through these leads to square pyramidal structures that can coordinate water and account for the observed monoaquated photoproducts.

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A study of the D(2h) to C(2h) pseudo-Jahn-Teller distortion in the edge-sharing bioctahedral complex Mo(2)(DXylF)(2)(O(2)CCH(3))(2)(mu(2)-O)(2) is presented. We have performed extensive density functional theory (DFT) and complete active space self-consistent field (CASSCF) calculations. For both the full target complex and a model derived by replacing xylyl and methyl groups with hydrogens we observe that the central Mo(2)(mu(2)-O)(2) motif displays C(2h) rather than D(2h) symmetry.

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