Publications by authors named "Justin Engel"

Chromothripsis describes the catastrophic shattering of mis-segregated chromosomes trapped within micronuclei. Although micronuclei accumulate DNA double-strand breaks and replication defects throughout interphase, how chromosomes undergo shattering remains unresolved. Using CRISPR-Cas9 screens, we identify a non-canonical role of the Fanconi anemia (FA) pathway as a driver of chromothripsis.

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Article Synopsis
  • Mitotic errors can lead to the formation of micronuclei containing misplaced chromosomes that are at risk of breaking apart through a process called chromothripsis.
  • Systematic inactivation of DNA double-strand break (DSB) repair pathways shows that the removal of key components of non-homologous end joining (NHEJ) reduces complex genomic rearrangements and changes the types of alterations produced.
  • When fragmented chromosomes are reintroduced into the nucleus, they are usually repaired by NHEJ within one cell cycle, while the absence of NHEJ leads to delayed repair and persistent cell cycle issues.
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Mitotic cell division is tightly monitored by checkpoints that safeguard the genome from instability. Failures in accurate chromosome segregation during mitosis can cause numerical aneuploidy, which was hypothesized by Theodor Boveri over a century ago to promote tumorigenesis. Recent interrogation of pan-cancer genomes has identified unexpected classes of chromosomal abnormalities, including complex rearrangements arising through chromothripsis.

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Errors in mitosis can generate micronuclei that entrap mis-segregated chromosomes, which are susceptible to catastrophic fragmentation through a process termed chromothripsis. The reassembly of fragmented chromosomes by error-prone DNA double-strand break (DSB) repair generates a spectrum of simple and complex genomic rearrangements that are associated with human cancers and disorders. How specific DSB repair pathways recognize and process these lesions remains poorly understood.

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Complex genome rearrangements can be generated by the catastrophic pulverization of missegregated chromosomes trapped within micronuclei through a process known as chromothripsis. As each chromosome contains a single centromere, it remains unclear how acentric fragments derived from shattered chromosomes are inherited between daughter cells during mitosis. Here we tracked micronucleated chromosomes with live-cell imaging and show that acentric fragments cluster in close spatial proximity throughout mitosis for asymmetric inheritance by a single daughter cell.

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Article Synopsis
  • CRISPR Cas9-based screening identifies USP1's role as a synthetic lethal target in cancers with DNA damage vulnerabilities, particularly in BRCA1/2 mutant and some wild-type tumors.
  • Inhibiting USP1 decreases DNA synthesis and causes S-phase-specific DNA damage, linked to the accumulation of mono- and polyubiquitinated PCNA.
  • This study suggests that targeting USP1 could offer a new therapeutic strategy for treating BRCA1/2 mutant tumors, as well as a subset of BRCA1/2 wild-type tumors, highlighting the importance of PCNA's posttranslational modifications.
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Unlabelled: Synthetic lethality is a genetic interaction that results in cell death when two genetic deficiencies co-occur but not when either deficiency occurs alone, which can be co-opted for cancer therapeutics. Pairs of paralog genes are among the most straightforward potential synthetic-lethal interactions by virtue of their redundant functions. Here, we demonstrate a paralog-based synthetic lethality by targeting vaccinia-related kinase 1 (VRK1) in glioblastoma (GBM) deficient of VRK2, which is silenced by promoter methylation in approximately two thirds of GBM.

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Replication stress response ensures impediments to DNA replication do not compromise replication fork stability and genome integrity. In a process termed replication fork protection, newly synthesized DNA at stalled replication forks is stabilized and protected from nuclease-mediated degradation. We report the identification of DDB1- and CUL4-associated factor 14 (DCAF14), a substrate receptor for Cullin4-RING E3 ligase (CRL4) complex, integral in stabilizing stalled replication forks.

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