Quantitative Characterization of Adhesion Work on Shale Surfaces and Discussion on the Influence of Roughness Based on Atomic Force Microscopy (AFM).

Adhesion is an intrinsic property of rocks and liquids. Investigating the factors contributing to its formation and the mechanisms governing its action is crucial for elucidating the adhesion work between solids and liquids. The adhesion work, serving as a parameter that characterizes the energy changes during the solid-liquid contact process, is a vital tool for probing this phenomenon.

Pore Structure Characterizations of Shale Oil Reservoirs with Heat Treatment: A Case Study from Dongying Sag, Bohai Bay Basin, China.

Heat treatment plays a significant role in determining the petrophysical properties of shale reservoirs; however, the existing studies on the evolution of pore structures are still insufficient. This study conducts a series of tests, including Rock-Eval, low-temperature nitrogen adsorption-desorption, nuclear magnetic resonance (NMR) , and - tests on samples from Shahejie Formation, Dongying Sag, Bohai Bay Basin. The tests aim to determine the changes in the shale pore structures under increasing heat treatments (ranging from 110 to 500 °C) and identify the factors that control pore structures.

Occurrence Characteristics of Water in Nano-Slit Pores under Different Solution Conditions: A Case Study on Kaolinite.

The presence of water in narrow pore spaces affects the occurrence and flow of methane, which in turn affects shale gas production. Therefore, studying the occurrence and distribution characteristics of water is of great significance to predict gas production. Based on molecular dynamics simulations, this study investigated the occurrence characteristics and influencing variables of liquid water in kaolinite nanopores in situ.

A quantum mechanics/molecular mechanics study on the hydrolysis mechanism of New Delhi metallo-β-lactamase-1.

New Delhi metallo-β-lactamase-1 (NDM-1) has emerged as a major global threat to human health for its rapid rate of dissemination and ability to make pathogenic microbes resistant to almost all known β-lactam antibiotics. In addition, effective NDM-1 inhibitors have not been identified to date. In spite of the plethora of structural and kinetic data available, the accurate molecular characteristics of and details on the enzymatic reaction of NDM-1 hydrolyzing β-lactam antibiotics remain incompletely understood.

Structure-based computational study of the hydrolysis of New Delhi metallo-β-lactmase-1.

New Delhi metallo-β-lactmase-1 (NDM-1) is an enzyme that confers antibiotic resistance to bacteria and is thus a serious threat to human health. Almost all clinically available β-lactam antibiotics can be hydrolyzed by NDM-1. To determine the mechanism behind the wide substrate diversity and strong catalytic ability of NDM-1, we explored the molecular interactions between NDM-1 and different β-lactam antibiotics using computational methods.

Three silver iodides with zero and one-dimensional hybrid structures directed by conjugated organic templates: synthesis and theoretical study.

Under the direction of large conjugated organic cationic SDAs (structure-directing agents), three silver(I) iodides, (ipq)4(Ag2I6 x 2I2) (1), {[pql][Ag2I3]}n (2), [(npql)2(Ag4I6)]n (3) (ipq+ = N-(isopentyl)-quinolinium, pql+ = N-propyl-quinolinium, npql+ = N-(n-pentyl)-quinolinium) have been synthesized. 1 presents a zero-dimensional structure constituting of ipq+ cations, [Ag2I6]4- anions and molecular iodine. But 2 and 3 consist of one-dimensional coordination polymers that could be described as edge-sharing AgI4 tetrahedra.

Multivalency iodine doped TiO2: preparation, characterization, theoretical studies, and visible-light photocatalysis.

Multivalency iodine (I(7)+/I(-)) doped TiO(2) were prepared via a combination of deposition-precipitation process and hydrothermal treatment. The as-prepared samples were characterized by X-ray diffraction, transmission electron microscopy, Brunauer-Emmett-Teller surface area, UV-vis diffuse reflectance spectra, X-ray photoelectron spectroscopy, surface photovoltage spectroscopy, and electric-field-induced surface photovoltage spectroscopy. The electronic structure calculations based on the density functional theory revealed that upon doping, new states that originated from the I atom of the IO(4) group are observed near the conduction-band bottom region of TiO(2), and the excitation from the valence band of TiO(2) to the surface IO(4-) is responsible for the visible-light response of the I-doped TiO(2).

A series of new copper iodobismuthates: structural relationships, optical band gaps affected by dimensionality, and distinct thermal stabilities.

Three new copper iodobismuthates, red tetranuclear [n-Bu(4)N][Cu(2)(CH(3)CN)(2)Bi(2)I(10)] (1), dark-red infinite linear [Et(4)N](2n)[Cu(2)Bi(2)I(10)](n) (2), and black polymeric ladderlike [Cu(CH(3)CN)(4)](2n)[Cu(2)Bi(2)I(10)](n) (3), crystallize from solutions of BiI3 and CuI in the presence of different cations. A regular structural relationship from 0-D (1) to 1-D linear anion chains (2) to 1-D ladderlike anion chains (3) is observed. The self-assembly of the basic building unit Cu(2)Bi(2)I(10) as altered by different cations is proposed to be the driving force for their formation.

Diverse genome structures of Salmonella paratyphi C.

Background: Salmonella paratyphi C, like S. typhi, is adapted to humans and causes typhoid fever. Previously we reported different genome structures between two strains of S.

Spontaneous conversion between mutL and 6 bpDeltamutL in Salmonella typhimurium LT7: association with genome diversification and possible roles in bacterial adaptation.

Previously, we reported the phenomenon of genome diversification in Salmonella typhimurium LT7, i.e., individual strains derived from LT7 kept changing the genome structure by inversions, translocations, duplications, and mutations.

Chemical anisotropies of carbon nanotubes and fullerenes caused by the curvature directivity.

The directional-curvature theory is developed as a rational basis for the strain energy and the chemical reactivity in single-walled carbon nanotubes (SWCNTs) and fullerenes. The directional curvature KD and its mean KM, derived from this theory, cover the overall curvatures of their bonds and atoms and break through the limitations of the pyramidalized-angle thetap approach, which is only available to atomic curvature. The directional-curvature theory demonstrates that KD and KM depend directly on the strain or reactive binding energies of the bonds and atoms and that there is approximate curvature conservation in SWCNTs and fullerenes.

Silver iodobismuthates: syntheses, structures, properties, and theoretical studies of [Bi2Ag2I10 2-]n and [Bi4Ag2I16 2-]n.

Two novel silver iodobismuthates have been obtained: (Et4N)2n-[Bi2Ag2I10]n (1) with one-dimensional infinite chains built from bimetallic tetranuclear units and (Et4N)2n[Bi4Ag2I16]n (2) with a two-dimensional 44 grid assembly of the tetranuclear Bi4I16 subunits as nodes and Ag atoms as linkages. Their optical band gaps, 2.05 and 1.

Carbon nanotubes functionalized by NO2: coexistence of charge transfer and radical transfer.

The adsorption of NO(2) molecules on a series of zigzag (n,0) single-walled carbon nanotubes (SWNTs) (n = 6-12) have been investigated by first-principles methods. The results indicate that the tube diameter and the concentration of NO(2) gas determine the interactions between NO(2) molecules and the tube. The chemisorption of a single NO(2) is only possible for the tube with a small diameter (n < 10), while the second NO(2) molecule can be chemisorbed for all tubes studied here.

Dissociative adsorption of carbon monoxide on Mo(110): first-principles theory.

The adsorption and dissociation of carbon monoxide on Mo (110) surface is studied with density functional theory. The results at different sites (atop, short bridge, long bridge, and hollow) are presented. The hollow site is found to be the most stable adsorption site for CO.

A theoretical study on the electronic structures of TiO2: Effect of Hartree-Fock exchange.

The effects of the Fock exchange on the geometries and electronic structures of TiO2 have been investigated by introducing a portion of Hartree-Fock (HF) exchange into the traditional density functional. Our results indicate that the functional with 13% HF exchange can correctly predict the band gap and the electronic structures of rutile TiO2, and such an approach is also suitable to describe the structural and electronic properties of anatase and brookite phases. For the TiO2 (110) surfaces, although the surface relaxations are insensitive to the variation of HF exchange, there are larger effects on the positions of the occupied surface-induced states.

The cycloadditions of various substituted carbenes, silylenes, and germylenes onto the diamond (100) surface: a theoretical exploration.

The cycloadditions of 21 singlet substituted carbenes, silylenes, and germylenes onto the diamond (100) surface have been theoretically studied by means of density functional theory coupled with effective cluster models. The calculated reaction energies and reaction pathways have disclosed that the substituents play an important effect on the reaction profiles for the additions of carbenes, silylenes, and germylenes onto the diamond (100) surface. Our theoretical investigations illustrate that, irrespective of carbenes, silylenes, and germylenes, the cycloadditions of those with electropositive substituents (such as H and CH(3)) onto diamond (100) are much more favorable than those with electronegative and pi-donating substituents (such as F and NH(2)) both thermodynamically and kinetically.

Predicting facile epoxidation of the diamond (100) surface by dioxiranes and subsequent ring-opening reactions with nucleophiles.

By means of density functional theory coupled with effective cluster models, we have theoretically predicted the viability of epoxidation of the diamond (100) surface by organic dioxiranes. In addition, subsequent ring-opening reactions of the as-formed epoxide surface species with some nucleophiles, including water, ammonia, and alcohol, have also been explored. The facile epoxidation of diamond (100) by dioxiranes presents a new alternative for oxidation of the diamond (100) surface.

Organic functionalization of the Si (100) and Ge (100) surfaces by cycloadditions of carbenes and nitrenes: a theoretical prediction.

By means of density functional theory (B3LYP/6-31G*) coupled with effective cluster models, we predict that the well-known cycloaddition reactions of carbenes and nitrenes to alkenes in organic chemistry can be employed as a new type of surface reaction to organically functionalize the Si (100) and Ge (100) surfaces at low temperature. The well-established abundance of carbenes and nitrenes addition chemistry in organic chemistry provides versatile flexibility of functionalizing the surfaces of Si (100) and Ge (100), which can potentially impart new organic functionalities to the semiconductors surface for novel applications in a diversity of fields. Our predictions strongly advance the concept of using organic reactions to modify the solid surface in a controlled manner and quite intriguing chemistry can lie in the material featuring the analogous bonding motif.

Functionalization of diamond (100) by organic cycloaddition reactions of nitrenes: a theoretical prediction.

[structure: see text] We predict the viability of organic cycloadditions of nitrenes onto the diamond (100) surface. This new type of surface reaction can be employed to functionalize diamond surface at low temperature, which might introduce new functionalities to the diamond surface for novel applications in a diversity of fields.

Organic functionalization of diamond (100) by addition reactions of carbene, silylene, and germylene: a theoretical prediction.

We present a theoretical prediction of the facile cycloadditions of carbene, silylene, and germylene onto the diamond (100) surface, a new type of surface reaction that can be employed to functionalize diamond surface at low temperature. This finding renders the plausibility that the diamond surface can be chemically modified by the well-known carbene addition chemistry, which might introduce new functionalities to the diamond surface for novel applications in a diversity of fields.

The adsorption and dissociation of Cl2 on the MgO (001) surface with vacancies: embedded cluster model study.

The adsorption of Cl(2) at a low-coordinated oxygen site (edge or corner site) and vacancy site (terrace, edge, corner F, F(+), or F(2+) center) has been studied by the density functional method, in conjunction with the embedded cluster models. First, we have studied the adsorption of Cl(2) at the edge and corner oxygen sites and the results show that Cl(2), energetically, is inclined to adsorb at the corner oxygen site. Moreover, similar to the most advantageous adsorption mode for Cl(2) on the MgO (001) perfect surface, the most favorable adsorption occurs when Cl(2) approaches the corner oxygen site along the normal direction.